RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 NOTCH3Q9UM47 2321 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 MAGEA13PA6NCF6 341 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 C16orf96A6NNT2 1141 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 A8MT66 165 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 PSMD11O00231 422 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 STC2O76061 302 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 NT5EP21589 574 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 S100A5P33763 92 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 MRPS35P82673 323 aaKnown RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 MRPS15P82914 257 aaKnown RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 NIPAL4Q0D2K0 466 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 MSLNQ13421 630 aaPredicted RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 PTGR1Q14914 329 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 SPRED3Q2MJR0 410 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 PAGE2BQ5JRK9 111 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 RNF220Q5VTB9 566 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 FAM219BQ5XKK7 198 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 RNF43Q68DV7 783 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 C15orf39Q6ZRI6 1047 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 PLEKHM3Q6ZWE6 761 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 ARCQ7LC44 396 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 ACVR1CQ8NER5 493 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 OR4K1Q8NGD4 311 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 PHF10Q8WUB8 498 aaKnown RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 APBB2Q92870 758 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 RERGQ96A58 199 aaPredicted RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 SIPA1Q96FS4 1042 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 TAC3Q9UHF0 121 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 CACNA1BQ00975 2339 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 IGKV6-21A0A0C4DH24 114 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 CARNS1A5YM72 827 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 LOC730098B7Z3J9 87 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 PPP6CO00743 305 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 JUNP05412 331 aaKnown RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 ACADSP16219 412 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 XRCC1P18887 633 aaPredicted RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 KIR3DL1P43629 444 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 NOVP48745 357 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 POLR2JP52435 117 aaKnown RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 ZNF132P52740 706 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 RAD23AP54725 363 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 PTP4A2Q12974 167 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 RAPSNQ13702 412 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 ACSBG2Q5FVE4 666 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 PERM1Q5SV97 790 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 GPR107Q5VW38 600 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 FAM46CQ5VWP2 391 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 CNKSR3Q6P9H4 555 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 GDPD4Q6W3E5 623 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 HIPK1Q86Z02 1210 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 ARMC8Q8IUR7 673 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 EPHX4Q8IUS5 362 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 CNTD1Q8N815 330 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 Q8N9G6 341 aaPredicted RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 TXNDC5Q8NBS9 432 aaKnown RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 IRGQQ8WZA9 623 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 C1QTNF7Q9BXJ2 289 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 RNF38Q9H0F5 515 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 PHPT1Q9NRX4 125 aaPredicted RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 INTS7Q9NVH2 962 aaKnown RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 C5AR2Q9P296 337 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 TBC1D14Q9P2M4 693 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 GMEB2Q9UKD1 530 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 ADAMTS5Q9UNA0 930 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 RNF11Q9Y3C5 154 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 ACTL7BQ9Y614 415 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 IGKV6D-21A0A0A0MT36 114 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 ZNF840PA6NDX5 716 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 FAM220BPB1ANY3 271 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 RTCAO00442 366 aaKnown RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 FKBP6O75344 327 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 PFKMP08237 780 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 ATP6V1C1P21283 382 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 LIPEQ05469 1076 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 NAB1Q13506 487 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 ZBTB6Q15916 424 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 PTCHD3Q3KNS1 767 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 CPTPQ5TA50 214 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 CAPN13Q6MZZ7 669 aaPredicted RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 SLC2A7Q6PXP3 512 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 B3GNT9Q6UX72 402 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 CADM2Q8N3J6 435 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 CPSF7Q8N684 471 aaKnown RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 NIPA2Q8N8Q9 360 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 ACMSDQ8TDX5 336 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 SMPDL3BQ92485 455 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 CENPTQ96BT3 561 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 JSRP1Q96MG2 331 aaPredicted RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 FCRL5Q96RD9 977 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 LRMDAQ9H2I8 198 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 AKTIPQ9H8T0 292 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 POLR1BQ9H9Y6 1135 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 RC3H2Q9HBD1 1191 aaKnown RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.74□□□□□ -1.81
LTN1-207ENST00000614971 TMEM51Q9NW97 253 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 KCTD5Q9NXV2 234 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 RCOR3Q9P2K3 495 aaPredicted RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 LEF1Q9UJU2 399 aaPredicted RBP3.74□□□□□ -1.81
LTN1-207ENST00000614971 SCML2Q9UQR0 700 aa3.74□□□□□ -1.81
LTN1-207ENST00000614971 HIDE1A8MVS5 230 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms