RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SH3BP1Q9Y3L3 701 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 ANGPTL3Q9Y5C1 460 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 ANKRD28O15084 1053 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 RAD51BO15315 384 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 FKTNO75072 461 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 VPS4BO75351 444 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 S100BP04271 92 aaPredicted RBP13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 BMP2P12643 396 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 SRCP12931 536 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 ITGALP20701 1170 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 VEGFBP49765 207 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 AP1S1P61966 158 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 PRKG2Q13237 762 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 PCBP2Q15366 365 aaKnown RBP eCLIP13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 CPSF6Q16630 551 aaKnown RBP eCLIP13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 PABPC1LQ4VXU2 614 aaKnown RBP13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 PDCD4Q53EL6 469 aaKnown RBP13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 ANKRD34AQ69YU3 496 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 PPP4R4Q6NUP7 873 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 TMEM214Q6NUQ4 689 aaKnown RBP13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 SERPINA13PQ6UXR4 307 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 RBFAQ8N0V3 343 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 FOXJ1Q92949 421 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 VPS50Q96JG6 964 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 RNF145Q96MT1 663 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 CORO1BQ9BR76 489 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 TBCDQ9BTW9 1192 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 BEGAINQ9BUH8 593 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 OCEL1Q9H607 264 aa13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 HECAQ9UBI9 543 aaPredicted RBP13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 PTBP2Q9UKA9 531 aaKnown RBP13.83□□□□□ -0.2
PCDHGA3-202ENST00000612467 FAM234BA2RU67 622 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 ACOX3O15254 700 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 CCL16O15467 120 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 UGT2B4P06133 528 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 CSF2RAP15509 400 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 IL10P22301 178 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 FASP25445 335 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 IST1P53990 364 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 ADARP55265 1226 aaKnown RBP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 HSPA14Q0VDF9 509 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 INPP5AQ14642 412 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 OTUD3Q5T2D3 398 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 GPRC6AQ5T6X5 926 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 SUSD1Q6UWL2 747 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 CHST15Q7LFX5 561 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 TCEAL8Q8IYN2 117 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 PHACTR4Q8IZ21 702 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 STK40Q8N2I9 435 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 C10orf111Q8N326 155 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 DTWD1Q8N5C7 304 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 BEND7Q8N7W2 519 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 TSPAN14Q8NG11 270 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 MAGEE2Q8TD90 523 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 SORCS1Q8WY21 1168 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 TCEAL4Q96EI5 215 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 AURKBQ96GD4 344 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 CCT7Q99832 543 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 OSBPL11Q9BXB4 747 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 SLC46A2Q9BY10 475 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 FAM126AQ9BYI3 521 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 MRPS26Q9BYN8 205 aaKnown RBP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 TRIM54Q9BYV2 358 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 GNPTGQ9UJJ9 305 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 CCL27Q9Y4X3 112 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 AQP12BA6NM10 295 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 YAP1P46937 504 aaKnown RBP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 MNX1P50219 401 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 CCT8P50990 548 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 TXNL4AP83876 142 aaKnown RBP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 ZIK1Q3SY52 487 aaPredicted RBP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 FAM174BQ3ZCQ3 159 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 SPANXN4Q5MJ08 99 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 PRMT9Q6P2P2 845 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 TMEM25Q86YD3 366 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 AQP12AQ8IXF9 295 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 RHBDF1Q96CC6 855 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 RBM38Q9H0Z9 239 aaKnown RBP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 CNOT11Q9UKZ1 510 aaKnown RBP13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 PCDHB1Q9Y5F3 818 aa13.82□□□□□ -0.2
PCDHGA3-202ENST00000612467 A0A1W2PQ67 120 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 OLFM2O95897 454 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 CCR7P32248 378 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 HSPA13P48723 471 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 PTSQ03393 145 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 BNIP2Q12982 314 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 LAPTM5Q13571 262 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 PLCL1Q15111 1095 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 AP1ARQ63HQ0 302 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 GLYATQ6IB77 296 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 DPY19L3Q6ZPD9 716 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 Q6ZVU0 165 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 OTOP2Q7RTS6 562 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 ANKRD46Q86W74 232 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 NXPE1Q8N323 547 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 ZNF786Q8N393 782 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 LIX1Q8N485 282 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 PDPRQ8NCN5 879 aa13.81□□□□□ -0.2
PCDHGA3-202ENST00000612467 TFAP2CQ92754 450 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms