RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 TXNDC11Q6PKC3 985 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 MFSD4AQ8N468 514 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 CCDC115Q96NT0 180 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 RPRD1AQ96P16 312 aaPredicted RBP14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 WDR12Q9GZL7 423 aaKnown RBP14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 NLE1Q9NVX2 485 aaPredicted RBP14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 GRXCR2A6NFK2 248 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 IQCF5A8MTL0 148 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 MITFO75030 526 aaPredicted RBP14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 GABARAPO95166 117 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 GSTT2P0CG29 244 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 GSTT2BP0CG30 244 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 OR1E1P30953 314 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 DCTP40126 519 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 RAPSNQ13702 412 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 KIAA0040Q15053 153 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 SLC39A12Q504Y0 691 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 PAGE2BQ5JRK9 111 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 CTSL3PQ5NE16 218 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 ZNF362Q5T0B9 420 aaPredicted RBP14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 MSRB3Q8IXL7 192 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 PHACTR4Q8IZ21 702 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 TTC30BQ8N4P2 665 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 NKAPQ8N5F7 415 aaKnown RBP14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 KLHDC9Q8NEP7 349 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 MDGA1Q8NFP4 955 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 OR7A2PQ8NGA2 310 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 OR8J3Q8NGG0 315 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 CD200R1Q8TD46 325 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 HPS1Q92902 700 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 FAM162AQ96A26 154 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 EXOC2Q96KP1 924 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 TRIB3Q96RU7 358 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 RHNO1Q9BSD3 238 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 YIPF2Q9BWQ6 316 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 SLC25A37Q9NYZ2 338 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 USE1Q9NZ43 259 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 ERVK-18Q9QC07 812 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 TMEFF2Q9UIK5 374 aaPredicted RBP14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 GIT1Q9Y2X7 761 aa14.88□□□□□ -0.03
PCDHGB1-202ENST00000611598 IGLV3-10A0A075B6K4 115 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 KDM1AO60341 852 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 NADKO95544 446 aaPredicted RBP14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 TGM1P22735 817 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 FMO3P31513 532 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 RGRP47804 291 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 PIK3CGP48736 1102 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 CYP4F3Q08477 520 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 LAPTM4AQ15012 233 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 MAPK11Q15759 364 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 INAQ16352 499 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 LAIR1Q6GTX8 287 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 GALNT5Q7Z7M9 940 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 C10orf111Q8N326 155 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 OR4F6Q8NGB9 312 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 SLC13A3Q8WWT9 602 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 GTF2H4Q92759 462 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 BRCA2P51587 3418 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 A0A0D9SEW6 157 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 M0QZQ0 153 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 E2F6O75461 281 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 NDST3O95803 873 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 SERPINF2P08697 491 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 CD6P30203 668 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 TGFBR1P36897 503 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 RPL38P63173 70 aaKnown RBP14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 MRPS6P82932 125 aaKnown RBP14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 IL5RAQ01344 420 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 CDK5R2Q13319 367 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 FAM174BQ3ZCQ3 159 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 AFTPHQ6ULP2 937 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 GLT6D1Q7Z4J2 308 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 SVOPLQ8N434 492 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 MCOLN3Q8TDD5 553 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 GLMNQ92990 594 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 RMDN1Q96DB5 314 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 VMP1Q96GC9 406 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 CORO1BQ9BR76 489 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 SLC6A13Q9NSD5 602 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 FLRT1Q9NZU1 646 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 ZMYM5Q9UJ78 669 aa14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 TRMT6Q9UJA5 497 aaKnown RBP14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 GPC6Q9Y625 555 aaPredicted RBP14.87□□□□□ -0.03
PCDHGB1-202ENST00000611598 CXCR6O00574 342 aa14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 OR7A17O14581 309 aa14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 TSPAN3O60637 253 aa14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 PRAMEF11O60813 436 aa14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 CHRNA1P02708 482 aa14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 FTH1P02794 183 aa14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 PKMP14618 531 aaKnown RBP14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 IL2P60568 153 aa14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 EPS8Q12929 822 aa14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 DGCR6Q14129 220 aa14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 PRR23BQ6ZRT6 265 aa14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 FRA10AC1Q70Z53 315 aa14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 GOLGA7Q7Z5G4 137 aa14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 DCP2Q8IU60 420 aaKnown RBP14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 BARD1Q99728 777 aaKnown RBP14.86□□□□□ -0.03
PCDHGB1-202ENST00000611598 VNN3Q9NY84 501 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms