RNA–Protein interactions for RNA: ENST00000608272.1

LINC00963-210, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 612 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-210ENST00000608272 CCM2Q9BSQ5 444 aa12.56□□□□□ -0.4
LINC00963-210ENST00000608272 PCDH18Q9HCL0 1135 aa12.56□□□□□ -0.4
LINC00963-210ENST00000608272 ARFGAP3Q9NP61 516 aa12.56□□□□□ -0.4
LINC00963-210ENST00000608272 IMP3Q9NV31 184 aaKnown RBP12.56□□□□□ -0.4
LINC00963-210ENST00000608272 CCDC66A2RUB6 948 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 EPHB6O15197 1021 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 ALBP02768 609 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 HLA-DQB2P05538 268 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 RARAP10276 462 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 IL1R2P27930 398 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 HMGCLP35914 325 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 CA7P43166 264 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 TDGF1P3P51864 188 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 NIPAL4Q0D2K0 466 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 LONRF2Q1L5Z9 754 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 PRAMEF17Q5VTA0 474 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 TLDC1Q6P9B6 456 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 ZNF295-AS1Q8N0V1 137 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 NIPA2Q8N8Q9 360 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 DDHD1Q8NEL9 900 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 CCDC120Q96HB5 630 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 TRIB3Q96RU7 358 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 SYT11Q9BT88 431 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 GPR63Q9BZJ6 419 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 LHPPQ9H008 270 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 WDR54Q9H977 334 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 ZBTB20Q9HC78 741 aaPredicted RBP12.55□□□□□ -0.4
LINC00963-210ENST00000608272 SMOXQ9NWM0 555 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 DTLQ9NZJ0 730 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 IFT80Q9P2H3 777 aaPredicted RBP12.55□□□□□ -0.4
LINC00963-210ENST00000608272 ZNF711Q9Y462 761 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 TTLL3Q9Y4R7 772 aa12.55□□□□□ -0.4
LINC00963-210ENST00000608272 AKAP9Q99996 3911 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 GSAPA4D1B5 854 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 MGAT4DA6NG13 374 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 MTX2O75431 263 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 PMPCBO75439 489 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 ONECUT2O95948 504 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 MMP2P08253 660 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 SLC35G4P0C7Q5 338 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 MYBL2P10244 700 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 PIM1P11309 404 aaPredicted RBP12.54□□□□□ -0.4
LINC00963-210ENST00000608272 PRDX3P30048 256 aaKnown RBP12.54□□□□□ -0.4
LINC00963-210ENST00000608272 CD86P42081 329 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 SMSP52788 366 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 CASP6P55212 293 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 RBPJQ06330 500 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 ITGA9Q13797 1035 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 BECN1Q14457 450 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 KHDC1Q4VXA5 237 aaKnown RBP12.54□□□□□ -0.4
LINC00963-210ENST00000608272 MLIPQ5VWP3 458 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 CCDC70Q6NSX1 233 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 ISLR2Q6UXK2 745 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 OR2L2Q8NH16 312 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 DNAJB8Q8NHS0 232 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 GDAP1Q8TB36 358 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 HSPH1Q92598 858 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 LINC00615Q96LM1 132 aaPredicted RBP12.54□□□□□ -0.4
LINC00963-210ENST00000608272 C12orf66Q96MD2 445 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 TAB2Q9NYJ8 693 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 TRIM10Q9UDY6 481 aa12.54□□□□□ -0.4
LINC00963-210ENST00000608272 NXT1Q9UKK6 140 aaKnown RBP12.54□□□□□ -0.4
LINC00963-210ENST00000608272 DOCK10Q96BY6 2186 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 C2orf74A8MZ97 194 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 H3BMH7 237 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 FANCGO15287 622 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 MFSD11O43934 449 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 CRYABP02511 175 aaKnown RBP12.53□□□□□ -0.4
LINC00963-210ENST00000608272 ITGAXP20702 1163 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 FDXRP22570 491 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 KLK7P49862 253 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 IFI35P80217 286 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-210ENST00000608272 MFAP5Q13361 173 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 GALNT3Q14435 633 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 KRT81Q14533 505 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 PRKD1Q15139 912 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-210ENST00000608272 KRT31Q15323 416 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 HIF1AQ16665 826 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 SLC5A12Q1EHB4 618 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 SMTNL2Q2TAL5 461 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 ATP13A5Q4VNC0 1218 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 FAM69BQ5VUD6 431 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 TMEM207Q6UWW9 146 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 ENOX1Q8TC92 643 aaKnown RBP12.53□□□□□ -0.4
LINC00963-210ENST00000608272 CHTF18Q8WVB6 975 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 N4BP2L2Q92802 583 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-210ENST00000608272 ERGIC2Q96RQ1 377 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 INSM2Q96T92 566 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-210ENST00000608272 ZNF670Q9BS34 389 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 SLC26A1Q9H2B4 701 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 SRMSQ9H3Y6 488 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 TFB2MQ9H5Q4 396 aaKnown RBP12.53□□□□□ -0.4
LINC00963-210ENST00000608272 CBX8Q9HC52 389 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 MCCC2Q9HCC0 563 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 FANCLQ9NW38 375 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 ABI3Q9P2A4 366 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 TMPRSS11EQ9UL52 423 aa12.53□□□□□ -0.4
LINC00963-210ENST00000608272 TRAV17A0A0B4J275 112 aa12.52□□□□□ -0.41
LINC00963-210ENST00000608272 CCL21O00585 134 aa12.52□□□□□ -0.41
LINC00963-210ENST00000608272 PRICKLE3O43900 615 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms