RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 HDAC10Q969S8 669 aa14.06□□□□□ -0.16
PKNOX1-210ENST00000607049 PBKQ96KB5 322 aa14.06□□□□□ -0.16
PKNOX1-210ENST00000607049 OR6C1Q96RD1 312 aa14.06□□□□□ -0.16
PKNOX1-210ENST00000607049 IL22Q9GZX6 179 aa14.06□□□□□ -0.16
PKNOX1-210ENST00000607049 SRMSQ9H3Y6 488 aa14.06□□□□□ -0.16
PKNOX1-210ENST00000607049 MVB12BQ9H7P6 319 aa14.06□□□□□ -0.16
PKNOX1-210ENST00000607049 GPN2Q9H9Y4 310 aaPredicted RBP14.06□□□□□ -0.16
PKNOX1-210ENST00000607049 GRPEL1Q9HAV7 217 aa14.06□□□□□ -0.16
PKNOX1-210ENST00000607049 CASS4Q9NQ75 786 aa14.06□□□□□ -0.16
PKNOX1-210ENST00000607049 PILRAQ9UKJ1 303 aa14.06□□□□□ -0.16
PKNOX1-210ENST00000607049 PCDHGA4Q9Y5G9 962 aa14.06□□□□□ -0.16
PKNOX1-210ENST00000607049 CCDC162PA2VCL2 907 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 OR6C74A6NCV1 312 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 TLCD2A6NGC4 264 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 MT-ND3P03897 115 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 CCNYL3P0C7X3 344 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 SFTPCP11686 197 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 ETS1P14921 441 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 NELFEP18615 380 aaKnown RBP14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 CXCR5P32302 372 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 NPY2RP49146 381 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 CDKN1CP49918 316 aaPredicted RBP14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 MC1RQ01726 317 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 ABHD18Q0P651 414 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 MAP7Q14244 749 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 PCID2Q5JVF3 399 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 KIAA1614Q5VZ46 1190 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 PACS1Q6VY07 963 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 PIANPQ8IYJ0 282 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 CLDN19Q8N6F1 224 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 GSDMBQ8TAX9 411 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 ELMO1Q92556 727 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 PMEPA1Q969W9 287 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 STAMBPL1Q96FJ0 436 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 BBC3Q96PG8 261 aaPredicted RBP14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 FANCEQ9HB96 536 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 RARRES3Q9UL19 164 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 TCAF1Q9Y4C2 921 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 TMEM184BQ9Y519 407 aaPredicted RBP14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 IGSF10Q6WRI0 2623 aa14.05□□□□□ -0.16
PKNOX1-210ENST00000607049 NBEAQ8NFP9 2946 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 GOLGA6L10A0A0M3HER8 536 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 ZNF891A8MT65 544 aaPredicted RBP14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 SGTAO43765 313 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 KIF1CO43896 1103 aaKnown RBP14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 KIF5CO60282 957 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 ZBTB11O95625 1053 aaPredicted RBP14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 GOT2P00505 430 aaKnown RBP14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 ZSCAN5DPP0CG00 497 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 TTPAP49638 278 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 ARSDP51689 593 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 SESN2P58004 480 aaPredicted RBP14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 HSD11B2P80365 405 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 TUBB3Q13509 450 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 DUS1LQ6P1R4 473 aaKnown RBP14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 C6orf15Q6UXA7 325 aaPredicted RBP14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 OR4E2Q8NGC2 313 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 OR13J1Q8NGT2 312 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 NAT14Q8WUY8 206 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 TFGQ92734 400 aaPredicted RBP14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 SGSM3Q96HU1 749 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 RMDN2Q96LZ7 410 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 CATSPER2Q96P56 530 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 FCRL4Q96PJ5 515 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 APMAPQ9HDC9 416 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 SOHLH2Q9NX45 425 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 SIDT1Q9NXL6 827 aaKnown RBP14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 POLG2Q9UHN1 485 aa14.04□□□□□ -0.16
PKNOX1-210ENST00000607049 GSAPA4D1B5 854 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 RPN2P04844 631 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 FGF5P12034 268 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 LIFP15018 202 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 CDH3P22223 829 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 FOXN2P32314 431 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 GRIA1P42261 906 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 BOP1Q14137 746 aaKnown RBP14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 TMED2Q15363 201 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 SIX1Q15475 284 aaPredicted RBP14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 ARMC3Q5W041 872 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 SDCCAG8Q86SQ7 713 aaPredicted RBP14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 PRUNE1Q86TP1 453 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 OTUD6BQ8N6M0 293 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 OR8K5Q8NH50 307 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 TTC9Q92623 222 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 MAGOHBQ96A72 148 aaKnown RBP14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 ELMO2Q96JJ3 720 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 SLC41A2Q96JW4 573 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 MAP3K3Q99759 626 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 OR52A5Q9H2C5 316 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 TFB2MQ9H5Q4 396 aaKnown RBP14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 CATSPERZQ9NTU4 200 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 SEMA5BQ9P283 1151 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 LNPEPQ9UIQ6 1025 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 ASF1AQ9Y294 204 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 PCDHB3Q9Y5E6 796 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 ATRXP46100 2492 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 BPTFQ12830 3046 aa14.03□□□□□ -0.16
PKNOX1-210ENST00000607049 IGHV5-51A0A0C4DH38 117 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms