RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TPOP07202 933 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 CSF1RP07333 972 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 CNPP09543 421 aaKnown RBP8.75□□□□□ -1.01
COMMD3-215ENST00000602574 ZNF806P0C7X5 589 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 DDX6P26196 483 aaKnown RBP eCLIP8.75□□□□□ -1.01
COMMD3-215ENST00000602574 PMS1P54277 932 aaKnown RBP8.75□□□□□ -1.01
COMMD3-215ENST00000602574 CASP7P55210 303 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 TNK2Q07912 1038 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 MERTKQ12866 999 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 ASAH1Q13510 395 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 TEAD4Q15561 434 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 NRF1Q16656 503 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 ZNF528Q3MIS6 628 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 CATSPEREQ5SY80 951 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 LIPNQ5VXI9 398 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 PMF1Q6P1K2 205 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 ABI1Q8IZP0 508 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 SVOPLQ8N434 492 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 GDPD1Q8N9F7 314 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 BANPQ8N9N5 519 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 RNF26Q9BY78 433 aaPredicted RBP8.75□□□□□ -1.01
COMMD3-215ENST00000602574 OPN3Q9H1Y3 402 aaPredicted RBP8.75□□□□□ -1.01
COMMD3-215ENST00000602574 DUSP22Q9NRW4 184 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 AGPAT3Q9NRZ7 376 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 INTS10Q9NVR2 710 aaKnown RBP8.75□□□□□ -1.01
COMMD3-215ENST00000602574 PPP4R1LQ9P1A2 415 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 ARHGAP28Q9P2N2 729 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 BACE2Q9Y5Z0 518 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 CNTNAP2Q9UHC6 1331 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 E5RI56 91 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 KCNK1O00180 336 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 ARVCFO00192 962 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 ARNTLO00327 626 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 SCAMP1O15126 338 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 TRIM24O15164 1050 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 RFPL3O75679 317 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 NELFEP18615 380 aaKnown RBP8.75□□□□□ -1.01
COMMD3-215ENST00000602574 CCR9P51686 369 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 CLCNKAP51800 687 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 NOMO3P69849 1222 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 TFDP2Q14188 446 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 NOMO1Q15155 1222 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 PIGGQ5H8A4 983 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 NXNL2Q5VZ03 156 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 OR5M10Q6IEU7 315 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 INTS5Q6P9B9 1019 aaKnown RBP8.75□□□□□ -1.01
COMMD3-215ENST00000602574 SLC26A9Q7LBE3 791 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 RASAL3Q86YV0 1011 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 ABRAQ8N0Z2 381 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 ZSWIM2Q8NEG5 633 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 ZMIZ2Q8NF64 920 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 TRIM2Q9C040 744 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 TMOD3Q9NYL9 352 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 KCNJ14Q9UNX9 436 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 TP53TG5Q9Y2B4 290 aa8.75□□□□□ -1.01
COMMD3-215ENST00000602574 SLC22A23A1A5C7 686 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 RFPL4AA6NLU0 287 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ANKRD63C9JTQ0 380 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 RFPL4AL1F8VTS6 287 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 COPEO14579 308 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ZNF197O14709 1029 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 TO15178 435 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 PCDHGA12O60330 932 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 GRIN3BO60391 1043 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 STX11O75558 287 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 GPX5O75715 221 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 HOXC4P09017 264 aaPredicted RBP8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ACSM4P0C7M7 580 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 PTBP1P26599 531 aaKnown RBP eCLIP8.74□□□□□ -1.01
COMMD3-215ENST00000602574 WNT5AP41221 380 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 SLC26A5P58743 744 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 TUBB3Q13509 450 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 NFYCQ13952 458 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 SCARB2Q14108 478 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 CTTNQ14247 550 aaKnown RBP8.74□□□□□ -1.01
COMMD3-215ENST00000602574 LLGL1Q15334 1064 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 DHCR24Q15392 516 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 HFEQ30201 348 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 UAP1L1Q3KQV9 507 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 FAM98BQ52LJ0 330 aaKnown RBP8.74□□□□□ -1.01
COMMD3-215ENST00000602574 OR2B11Q5JQS5 317 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 DLEU7Q6UYE1 221 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 FAM35AQ86V20 835 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 C9orf62Q8N4C0 152 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ZNF321PQ8N8H1 164 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 OR9A1PQ8NGU1 263 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 CREB3L4Q8TEY5 395 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ROBO4Q8WZ75 1007 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 LRFN5Q96NI6 719 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 FYTTD1Q96QD9 318 aaKnown RBP8.74□□□□□ -1.01
COMMD3-215ENST00000602574 GPR62Q9BZJ7 368 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 NXF2Q9GZY0 626 aaKnown RBP8.74□□□□□ -1.01
COMMD3-215ENST00000602574 DNTTIP1Q9H147 329 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 ANKRD19PQ9H560 264 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 PRMT8Q9NR22 394 aaPredicted RBP8.74□□□□□ -1.01
COMMD3-215ENST00000602574 IFT80Q9P2H3 777 aaPredicted RBP8.74□□□□□ -1.01
COMMD3-215ENST00000602574 EIF2B4Q9UI10 523 aaKnown RBP8.74□□□□□ -1.01
COMMD3-215ENST00000602574 OSGIN1Q9UJX0 560 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 PCDHA1Q9Y5I3 950 aa8.74□□□□□ -1.01
COMMD3-215ENST00000602574 AKAP11Q9UKA4 1901 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms