RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 XIAPP98170 497 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 AP1B1Q10567 949 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 RAPSNQ13702 412 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 GTF2H3Q13889 308 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 SSPNQ14714 243 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 MYBPC3Q14896 1274 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 NCF4Q15080 339 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 PDK1Q15118 436 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 PRKD1Q15139 912 aaPredicted RBP5.93□□□□□ -1.46
VRK3-220ENST00000600259 ASTE1Q2TB18 679 aaPredicted RBP5.93□□□□□ -1.46
VRK3-220ENST00000600259 ANO6Q4KMQ2 910 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 BCL7AQ4VC05 210 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 DCAF10Q5QP82 559 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 FNBP1LQ5T0N5 605 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 TMTC4Q5T4D3 741 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 VWA5B1Q5TIE3 1220 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 ZDHHC20Q5W0Z9 365 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 IGFL2Q6UWQ7 119 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 FAM151BQ6UXP7 276 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 MRGPREQ86SM8 312 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 DAAM2Q86T65 1068 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 CUZD1Q86UP6 607 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 KCNMB4Q86W47 210 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 OOSP2Q86WS3 158 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 SRRM1Q8IYB3 904 aaKnown RBP5.93□□□□□ -1.46
VRK3-220ENST00000600259 ADGRF3Q8IZF5 1079 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 IQCKQ8N0W5 287 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 TTC13Q8NBP0 860 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 OR4E2Q8NGC2 313 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 GDAP1Q8TB36 358 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 ZNF398Q8TD17 642 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 RMDN2Q96LZ7 410 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 C12orf66Q96MD2 445 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 TTC25Q96NG3 672 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 PACSIN1Q9BY11 444 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 ACTR5Q9H9F9 607 aaPredicted RBP5.93□□□□□ -1.46
VRK3-220ENST00000600259 FAM60AQ9NP50 221 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 SLC22A11Q9NSA0 550 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 IMP3Q9NV31 184 aaKnown RBP5.93□□□□□ -1.46
VRK3-220ENST00000600259 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.93□□□□□ -1.46
VRK3-220ENST00000600259 UVRAGQ9P2Y5 699 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 FAM153AQ9UHL3 310 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 CAPN11Q9UMQ6 739 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 B3GNT3Q9Y2A9 372 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 PCDHGA10Q9Y5H3 936 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 COPG1Q9Y678 874 aaKnown RBP5.93□□□□□ -1.46
VRK3-220ENST00000600259 CNTRLQ7Z7A1 2325 aa5.93□□□□□ -1.46
VRK3-220ENST00000600259 MTORP42345 2549 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 F8P00451 2351 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 C2CD3Q4AC94 2353 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 A0A0A6YYK5 440 aaPredicted RBP5.92□□□□□ -1.46
VRK3-220ENST00000600259 GLYATL1P3A0A0U1RQE8 302 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 LRRD1A4D1F6 860 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 TMEM150CB9EJG8 249 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 BTN3A1O00481 513 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 E2F3O00716 465 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 ZNF749O43361 778 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 ONECUT2O95948 504 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 POLBP06746 335 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 UMODP07911 640 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 H2AFZP0C0S5 128 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 TPBGLP0DKB5 382 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 PVRP15151 417 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 NFKB1P19838 968 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 CDH3P22223 829 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 NDUFS1P28331 727 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 PDHA2P29803 388 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 PBLDP30039 288 aaPredicted RBP5.92□□□□□ -1.46
VRK3-220ENST00000600259 GCGRP47871 477 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 PREPP48147 710 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 LMAN1P49257 510 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 RRADP55042 308 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 FOXL2P58012 376 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 ADCY2Q08462 1091 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 XRCC4Q13426 336 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 NFKBIBQ15653 356 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 SLC1A5Q15758 541 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 ZIC1Q15915 447 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 FILIP1LQ4L180 1135 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 SP5Q6BEB4 398 aaPredicted RBP5.92□□□□□ -1.46
VRK3-220ENST00000600259 CCDC70Q6NSX1 233 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 MRPL14Q6P1L8 145 aaKnown RBP5.92□□□□□ -1.46
VRK3-220ENST00000600259 MFSD7Q6UXD7 560 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 RANBP10Q6VN20 620 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 CDHR3Q6ZTQ4 885 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 MICALCLQ6ZW33 695 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 H2AFVQ71UI9 128 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 DET1Q7L5Y6 550 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 PPP1R32Q7Z5V6 425 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 SLC34A3Q8N130 599 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 GALNT16Q8N428 558 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 SLC25A41Q8N5S1 370 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 PHC3Q8NDX5 983 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 ACVR1CQ8NER5 493 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 FLVCR1-AS1Q8TAF5 88 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 CLIP3Q96DZ5 547 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 C5orf34Q96MH7 638 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 IP6K3Q96PC2 410 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 GBP5Q96PP8 586 aa5.92□□□□□ -1.46
VRK3-220ENST00000600259 FCRL5Q96RD9 977 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms