RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 LCA5LO95447 670 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 RALBP11234 206 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 ATP5OP48047 213 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 GEMP55040 296 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 ADCY2Q08462 1091 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 TFDP3Q5H9I0 405 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 PLEKHS1Q5SXH7 462 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 IZUMO3Q5VZ72 239 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 LCN10Q6JVE6 187 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 DAAM2Q86T65 1068 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 DSELQ8IZU8 1212 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 CARFQ8N187 725 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 OR4K2Q8NGD2 314 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 LRFN5Q96NI6 719 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 FERD3LQ96RJ6 166 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 CCM2Q9BSQ5 444 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 FICDQ9BVA6 458 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 MFRPQ9BY79 579 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 SRMSQ9H3Y6 488 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 MLXIPLQ9NP71 852 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 SLAMF7Q9NQ25 335 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 LATS2Q9NRM7 1088 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 C1GALT1Q9NS00 363 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 ABHD10Q9NUJ1 306 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 SMOXQ9NWM0 555 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 LUZP4Q9P127 313 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 PLEKHB1Q9UF11 243 aaPredicted RBP10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 FKBPLQ9UIM3 349 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 CRLS1Q9UJA2 301 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 BTRCQ9Y297 605 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 MAP4K5Q9Y4K4 846 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 HEBP2Q9Y5Z4 205 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 ALG6Q9Y672 507 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 ARL5AQ9Y689 179 aa10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 SPENQ96T58 3664 aaKnown RBP10.28□□□□□ -0.76
CHMP2A-202ENST00000596708 USP9YO00507 2555 aaPredicted RBP10.27□□□□□ -0.76
CHMP2A-202ENST00000596708 HACD1B0YJ81 288 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 MATN2O00339 956 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 PSTPIP1O43586 416 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 ZRANB2O95218 330 aaKnown RBP eCLIP10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 RAB40ALP0C0E4 278 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 PYGMP11217 842 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 CYP2A7P20853 494 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 PREPP48147 710 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 TMPRSS15P98073 1019 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 LAMB3Q13751 1172 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 TAF1AQ15573 450 aaPredicted RBP10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 INPP5JQ15735 1006 aaPredicted RBP10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 TAZQ16635 292 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 BCL7AQ4VC05 210 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 ZNF517Q6ZMY9 492 aaPredicted RBP10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 RCOR2Q8IZ40 523 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 LILRA3Q8N6C8 439 aaPredicted RBP10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 ACVR1CQ8NER5 493 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 FDCSPQ8NFU4 85 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 ADAMTS17Q8TE56 1095 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 SSC4DQ8WTU2 575 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 LCN9Q8WX39 176 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 LINC00615Q96LM1 132 aaPredicted RBP10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 RMDN2Q96LZ7 410 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 APOL2Q9BQE5 337 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 FERMT1Q9BQL6 677 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 NLNQ9BYT8 704 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 FAM96AQ9H5X1 160 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 C10orf88Q9H8K7 445 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 ACTR5Q9H9F9 607 aaPredicted RBP10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 SYTL2Q9HCH5 934 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 SERTAD3Q9UJW9 196 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 TRHDEQ9UKU6 1024 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 TCFL5Q9UL49 500 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 PCDHGB7Q9Y5F8 929 aa10.27□□□□□ -0.77
CHMP2A-202ENST00000596708 hCG_1818297A0A087WSY0 165 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 CCDC66A2RUB6 948 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 C5orf60A6NFR6 353 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 CFAP99D6REC4 459 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 IFRD1O00458 451 aaPredicted RBP10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 SEMA7AO75326 666 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 ANXA9O76027 345 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 SORBS2O94875 1100 aaKnown RBP10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 CRTAMO95727 393 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 AGXTP21549 392 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 RBL1P28749 1068 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 PRDX3P30048 256 aaKnown RBP10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 LMAN1P49257 510 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 VAV2P52735 878 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 ABRQ12979 859 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 PRPSAP1Q14558 356 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 EIF2S3LQ2VIR3 472 aaKnown RBP10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 PTCHD3Q3KNS1 767 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 CCDC181Q5TID7 509 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 FAM69BQ5VUD6 431 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 PAPD7Q5XG87 772 aaKnown RBP10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 ITPRIPL1Q6GPH6 555 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 JMJD6Q6NYC1 403 aaPredicted RBP10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 ZNF449Q6P9G9 518 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 MED25Q71SY5 747 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 HOOK3Q86VS8 718 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 SYTL1Q8IYJ3 562 aa10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 TMEM102Q8N9M5 508 aaPredicted RBP10.26□□□□□ -0.77
CHMP2A-202ENST00000596708 OR13C4Q8NGS5 318 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms