RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 VCANP13611 3396 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 MGAT4DA6NG13 374 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 SLC16A5O15375 505 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 HOXC4P09017 264 aaPredicted RBP20.36■□□□□ 0.85
PNKP-203ENST00000593946 ENO2P09104 434 aaPredicted RBP20.36■□□□□ 0.85
PNKP-203ENST00000593946 HNRNPA2B1P22626 353 aaKnown RBP20.36■□□□□ 0.85
PNKP-203ENST00000593946 MPSTP25325 297 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 EEF1DP29692 281 aaKnown RBP20.36■□□□□ 0.85
PNKP-203ENST00000593946 AGTR2P50052 363 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 ARHGAP8P85298 464 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 PRKAA1Q13131 559 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 UBE2R2Q712K3 238 aaPredicted RBP20.36■□□□□ 0.85
PNKP-203ENST00000593946 ZNF771Q7L3S4 317 aaPredicted RBP20.36■□□□□ 0.85
PNKP-203ENST00000593946 WDR75Q8IWA0 830 aaKnown RBP20.36■□□□□ 0.85
PNKP-203ENST00000593946 OXR1Q8N573 874 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 SIKE1Q9BRV8 207 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 C6orf106Q9H6K1 298 aaPredicted RBP20.36■□□□□ 0.85
PNKP-203ENST00000593946 PARVBQ9HBI1 364 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 CD320Q9NPF0 282 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 PDE10AQ9Y233 779 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 SLC17A4Q9Y2C5 497 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.36■□□□□ 0.85
PNKP-203ENST00000593946 DNMT3AQ9Y6K1 912 aaPredicted RBP20.36■□□□□ 0.85
PNKP-203ENST00000593946 A0A0G2JND7 137 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 POM121BA6NF01 834 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 ZNF217O75362 1048 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 APBB3O95704 486 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 CCR5P51681 352 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 NAA20P61599 178 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 PLOD1Q02809 727 aaPredicted RBP20.36■□□□□ 0.85
PNKP-203ENST00000593946 EML5Q05BV3 1969 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 CDKL4Q5MAI5 379 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 CFAP206Q8IYR0 622 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 GJD3Q8N144 294 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 ASB2Q96Q27 587 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 PLCD4Q9BRC7 762 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 KCNK4Q9NYG8 393 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 PTBP2Q9UKA9 531 aaKnown RBP20.36■□□□□ 0.85
PNKP-203ENST00000593946 PRKAB1Q9Y478 270 aa20.36■□□□□ 0.85
PNKP-203ENST00000593946 ERICH4A6NGS2 130 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 STK25O00506 426 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 EBAG9O00559 213 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 FPGTO14772 594 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 GRID2O43424 1007 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 PSIP1O75475 530 aaKnown RBP20.35■□□□□ 0.85
PNKP-203ENST00000593946 S100BP04271 92 aaPredicted RBP20.35■□□□□ 0.85
PNKP-203ENST00000593946 IGHV4-34P06331 123 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 CEACAM5P06731 702 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 ALOX15P16050 662 aaPredicted RBP20.35■□□□□ 0.85
PNKP-203ENST00000593946 PDHA2P29803 388 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 CD6P30203 668 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 CDKL1Q00532 357 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 PLA2G4EQ3MJ16 856 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 FBXO48Q5FWF7 155 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 ANKS6Q68DC2 871 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 TPSD1Q9BZJ3 242 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 RMI1Q9H9A7 625 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 EBF2Q9HAK2 575 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 EML4Q9HC35 981 aaKnown RBP20.35■□□□□ 0.85
PNKP-203ENST00000593946 ZDHHC2Q9UIJ5 367 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 PCTPQ9UKL6 214 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 USH1CQ9Y6N9 552 aa20.35■□□□□ 0.85
PNKP-203ENST00000593946 LRP4O75096 1905 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 H3BM21 787 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 CACNB4O00305 520 aaPredicted RBP20.34■□□□□ 0.85
PNKP-203ENST00000593946 KMOO15229 486 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 GUCA1CO95843 209 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 FUCA1P04066 466 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 MAPK9P45984 424 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 RPIAP49247 311 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 RPL14P50914 215 aaKnown RBP20.34■□□□□ 0.85
PNKP-203ENST00000593946 HK2P52789 917 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 CLDN2P57739 230 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 KIAA1024LP59773 190 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 MTAPQ13126 283 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 NFE2L1Q14494 772 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 PCBP2Q15366 365 aaKnown RBP eCLIP20.34■□□□□ 0.85
PNKP-203ENST00000593946 KIAA0895LQ68EN5 471 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 SULT1C3Q6IMI6 304 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 C6orf89Q6UWU4 347 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 AMZ2Q86W34 360 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 ZNF483Q8TF39 744 aaPredicted RBP20.34■□□□□ 0.85
PNKP-203ENST00000593946 RHBDF1Q96CC6 855 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 BMFQ96LC9 184 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 RMDN2Q96LZ7 410 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 NSUN5Q96P11 429 aaKnown RBP20.34■□□□□ 0.85
PNKP-203ENST00000593946 TMEM120AQ9BXJ8 343 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 SHCBP1LQ9BZQ2 653 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 DPEP2Q9H4A9 486 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 SLC23A2Q9UGH3 650 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 SIT1Q9Y3P8 196 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 ASB1Q9Y576 335 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 TNPO3Q9Y5L0 923 aaKnown RBP20.34■□□□□ 0.85
PNKP-203ENST00000593946 CEP192Q8TEP8 1941 aa20.34■□□□□ 0.85
PNKP-203ENST00000593946 IGHV1OR15-9A0A0B4J2B8 117 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 KLHL33A6NCF5 533 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 E2F3O00716 465 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 UBFD1O14562 309 aaKnown RBP20.33■□□□□ 0.85
PNKP-203ENST00000593946 ZNF195O14628 629 aa20.33■□□□□ 0.85
PNKP-203ENST00000593946 AKT2P31751 481 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms