RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 NBPF19A0A087WUL8 3843 aa22.06■■□□□ 1.12
SSBP4-203ENST00000593641 AKR1B15C9JRZ8 316 aaPredicted RBP22.05■■□□□ 1.12
SSBP4-203ENST00000593641 CFAP99D6REC4 459 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 POLBP06746 335 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 POLR2CP19387 275 aaPredicted RBP22.05■■□□□ 1.12
SSBP4-203ENST00000593641 RBL1P28749 1068 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 MAGEA1P43355 309 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 MARCKSL1P49006 195 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 CCL11P51671 97 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 PRPSAP1Q14558 356 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 ZNF517Q6ZMY9 492 aaPredicted RBP22.05■■□□□ 1.12
SSBP4-203ENST00000593641 BBS12Q6ZW61 710 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 DAAM2Q86T65 1068 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 OR4E2Q8NGC2 313 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 CPT1CQ8TCG5 803 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 HM13Q8TCT9 377 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 ULK4Q96C45 1275 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 HEMGNQ9BXL5 484 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 CHST8Q9H2A9 424 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 G3BP2Q9UN86 482 aaKnown RBP22.05■■□□□ 1.12
SSBP4-203ENST00000593641 SNX7Q9UNH6 387 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 SHANK1Q9Y566 2161 aa22.05■■□□□ 1.12
SSBP4-203ENST00000593641 PRRC2CQ9Y520 2896 aaKnown RBP22.05■■□□□ 1.12
SSBP4-203ENST00000593641 MACROD2A1Z1Q3 448 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 GSAPA4D1B5 854 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 BLACEA4D250 179 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 MAP3K7O43318 606 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 CRTAMO95727 393 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 PRLHRP49683 370 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 LAMB3Q13751 1172 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 CAPRIN2Q6IMN6 1127 aaKnown RBP22.04■■□□□ 1.12
SSBP4-203ENST00000593641 FBXO38Q6PIJ6 1188 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 ACVR1CQ8NER5 493 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 CLIP3Q96DZ5 547 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 PPM1MQ96MI6 270 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 APOL2Q9BQE5 337 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 SRMSQ9H3Y6 488 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 SYTL2Q9HCH5 934 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 LRRC4CQ9HCJ2 640 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 C1GALT1Q9NS00 363 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 POMT2Q9UKY4 750 aa22.04■■□□□ 1.12
SSBP4-203ENST00000593641 SLC9B1P1A6NJY1 282 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 MEN1O00255 615 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 STK10O94804 968 aaKnown RBP22.03■■□□□ 1.12
SSBP4-203ENST00000593641 ITGALP20701 1170 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 PTGIRP43119 386 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 C11orf63Q6NUN7 778 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 RANBP10Q6VN20 620 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 DSELQ8IZU8 1212 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 LILRA3Q8N6C8 439 aaPredicted RBP22.03■■□□□ 1.12
SSBP4-203ENST00000593641 ENDOVQ8N8Q3 282 aaKnown RBP22.03■■□□□ 1.12
SSBP4-203ENST00000593641 SLC38A9Q8NBW4 561 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 GALNT11Q8NCW6 608 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 HEXDCQ8WVB3 486 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 LCN9Q8WX39 176 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 LRRC45Q96CN5 670 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 PSMG3-AS1Q96PY0 264 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 COPS8Q99627 209 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 GORASP1Q9BQQ3 440 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 SLC7A5P2Q9GIP4 190 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 C10orf88Q9H8K7 445 aa22.03■■□□□ 1.12
SSBP4-203ENST00000593641 TMEM150CB9EJG8 249 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 IFRD1O00458 451 aaPredicted RBP22.02■■□□□ 1.12
SSBP4-203ENST00000593641 RAB40ALP0C0E4 278 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 ATP1B2P14415 290 aaPredicted RBP22.02■■□□□ 1.12
SSBP4-203ENST00000593641 CTNNA2P26232 953 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 PSMB4P28070 264 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 HADHAP40939 763 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 UQCRFS1P47985 274 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 PREPP48147 710 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 XIAPP98170 497 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 ABRQ12979 859 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 PLEKHS1Q5SXH7 462 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 SNX20Q7Z614 316 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 CDKL3Q8IVW4 592 aaPredicted RBP22.02■■□□□ 1.12
SSBP4-203ENST00000593641 NXPE1Q8N323 547 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 OR13C4Q8NGS5 318 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 KRT35Q92764 455 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 FERD3LQ96RJ6 166 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 NLNQ9BYT8 704 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 VPS37BQ9H9H4 285 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 MLXIPLQ9NP71 852 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 ZNF451Q9Y4E5 1061 aa22.02■■□□□ 1.12
SSBP4-203ENST00000593641 C17orf113A0A1B0GUU1 675 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 CCDC66A2RUB6 948 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 AGAP14A8MT82 685 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 DDX3YO15523 660 aaKnown RBP22.01■■□□□ 1.11
SSBP4-203ENST00000593641 SGTAO43765 313 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 AGFG2O95081 481 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 CYP2A7P20853 494 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 ADRA1AP35348 466 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 COPS2P61201 443 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 TMPRSS15P98073 1019 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 OLIG2Q13516 323 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 NADK2Q4G0N4 442 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 ANKRD20A2Q5SQ80 823 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 FHL5Q5TD97 284 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 ANKRD20A1Q5TYW2 823 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 PRAMEF17Q5VTA0 474 aa22.01■■□□□ 1.11
SSBP4-203ENST00000593641 ANKRD20A3Q5VUR7 823 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms