RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 ZNF567Q8N184 647 aa10.89□□□□□ -0.67
PRKCSH-220ENST00000593104 PHC3Q8NDX5 983 aa10.89□□□□□ -0.67
PRKCSH-220ENST00000593104 BRSK1Q8TDC3 778 aa10.89□□□□□ -0.67
PRKCSH-220ENST00000593104 INPP5DQ92835 1189 aa10.89□□□□□ -0.67
PRKCSH-220ENST00000593104 KIR3DX1Q9H7L2 352 aa10.89□□□□□ -0.67
PRKCSH-220ENST00000593104 ACTR5Q9H9F9 607 aaPredicted RBP10.89□□□□□ -0.67
PRKCSH-220ENST00000593104 GPR83Q9NYM4 423 aa10.89□□□□□ -0.67
PRKCSH-220ENST00000593104 POMT2Q9UKY4 750 aa10.89□□□□□ -0.67
PRKCSH-220ENST00000593104 BTRCQ9Y297 605 aa10.89□□□□□ -0.67
PRKCSH-220ENST00000593104 CSAG2Q9Y5P2 127 aa10.89□□□□□ -0.67
PRKCSH-220ENST00000593104 SYCE3A1L190 88 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 MGAT4DA6NG13 374 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 LDB2O43679 373 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 CST8O60676 142 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 DPM1O60762 260 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 PRAMEF1O95521 474 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 LDLRP01130 860 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 SLC35G4P0C7Q5 338 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 TMEM253P0C7T8 217 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 CBSLP0DN79 551 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 CYP2A7P20853 494 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 CBSP35520 551 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 PREPP48147 710 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 MARCKSL1P49006 195 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 CDKN1CP49918 316 aaPredicted RBP10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 SLC14A2Q15849 920 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 SLC18A3Q16572 532 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 TMTC4Q5T4D3 741 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 SPOCD1Q6ZMY3 1216 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 CDHR3Q6ZTQ4 885 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 PID1Q7Z2X4 250 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 OR4K2Q8NGD2 314 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 OR13C4Q8NGS5 318 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 OR2L2Q8NH16 312 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 ZNF398Q8TD17 642 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 TFB1MQ8WVM0 346 aaKnown RBP10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 CPT1BQ92523 772 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 PNPLA2Q96AD5 504 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 FERD3LQ96RJ6 166 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 CD180Q99467 661 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 CHP1Q99653 195 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 FICDQ9BVA6 458 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 NLNQ9BYT8 704 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 ZCCHC2Q9C0B9 1178 aaKnown RBP10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 ASB8Q9H765 288 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 FAM60AQ9NP50 221 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 TFR2Q9UP52 801 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 NTNG1Q9Y2I2 539 aa10.88□□□□□ -0.67
PRKCSH-220ENST00000593104 SNRNP200O75643 2136 aaKnown RBP10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 GOLGA6L22H0YM25 854 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 STX7O15400 261 aaKnown RBP10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 ZNF749O43361 778 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 CNOT3O75175 753 aaKnown RBP10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 CBX6O95503 412 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 RAB40ALP0C0E4 278 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 COMTP21964 271 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 PDHA2P29803 388 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 PRDX3P30048 256 aaKnown RBP10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 CDKN2BP42772 138 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 GSDMDP57764 484 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 PRKG2Q13237 762 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 ITGA9Q13797 1035 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 KRT33BQ14525 404 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 NCF4Q15080 339 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 ZIC1Q15915 447 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 LONRF2Q1L5Z9 754 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 MLIPQ5VWP3 458 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 ZNF385CQ66K41 422 aaPredicted RBP10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 MAMDC2Q7Z304 686 aaPredicted RBP10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 MRGPREQ86SM8 312 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 BPHLQ86WA6 291 aaPredicted RBP10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 CCDC50Q8IVM0 306 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 FAM20CQ8IXL6 584 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 SRRM1Q8IYB3 904 aaKnown RBP10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 LMNTD1Q8N9Z9 388 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 LCN9Q8WX39 176 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 SEC14L1Q92503 715 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 LRFN5Q96NI6 719 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 SMAD5Q99717 465 aaKnown RBP10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 FAM118BQ9BPY3 351 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 HGH1Q9BTY7 390 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 SLC7A5P2Q9GIP4 190 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 SPRTNQ9H040 489 aaPredicted RBP10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 SRMSQ9H3Y6 488 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 LATS2Q9NRM7 1088 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 CUEDC1Q9NWM3 386 aaPredicted RBP10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 RSPH14Q9UHP6 348 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 PKP3Q9Y446 797 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 SEC16AO15027 2179 aa10.87□□□□□ -0.67
PRKCSH-220ENST00000593104 TEX15Q9BXT5 2789 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 SSU72P8A0A1W2PR75 194 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 CCDC66A2RUB6 948 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 KCNJ13O60928 360 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 KLF7O75840 302 aaPredicted RBP10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 SRP72O76094 671 aaKnown RBP10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 XIAPP98170 497 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 PRKAA1Q13131 559 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 SPARCL1Q14515 664 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 NAPRTQ6XQN6 538 aa10.86□□□□□ -0.67
PRKCSH-220ENST00000593104 GLIS1Q8NBF1 620 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms