RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 INHBAP08476 426 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 CTSEP14091 401 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 RPL10P27635 214 aaKnown RBP9.45□□□□□ -0.9
DDX39A-220ENST00000593008 DLG1Q12959 904 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 ST3GAL2Q16842 350 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 INSCQ1MX18 579 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 KRT71Q3SY84 523 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 CEP85LQ5SZL2 805 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 RNF187Q5TA31 235 aaPredicted RBP9.45□□□□□ -0.9
DDX39A-220ENST00000593008 LYPLAL1Q5VWZ2 237 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 ZNF449Q6P9G9 518 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 CYS1Q717R9 158 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 TMPRSS7Q7RTY8 843 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 LMNTD2Q8IXW0 634 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 IQCKQ8N0W5 287 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 ANKRD49Q8WVL7 239 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 JPH3Q8WXH2 748 aaPredicted RBP9.45□□□□□ -0.9
DDX39A-220ENST00000593008 TCF12Q99081 682 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 GPR22Q99680 433 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 TMEM121BQ9BXQ6 578 aaPredicted RBP9.45□□□□□ -0.9
DDX39A-220ENST00000593008 ZCCHC2Q9C0B9 1178 aaKnown RBP9.45□□□□□ -0.9
DDX39A-220ENST00000593008 C12orf65Q9H3J6 166 aaKnown RBP9.45□□□□□ -0.9
DDX39A-220ENST00000593008 OSGEPL1Q9H4B0 414 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 COG4Q9H9E3 785 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 PRDM8Q9NQV8 689 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 SNX15Q9NRS6 342 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 SPATS2LQ9NUQ6 558 aaKnown RBP9.45□□□□□ -0.9
DDX39A-220ENST00000593008 PSMC3IPQ9P2W1 217 aaPredicted RBP9.45□□□□□ -0.9
DDX39A-220ENST00000593008 TBC1D29Q9UFV1 150 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 DOLKQ9UPQ8 538 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 CDYLQ9Y232 598 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 CFAP20Q9Y6A4 193 aaKnown RBP9.45□□□□□ -0.9
DDX39A-220ENST00000593008 U3KQA8 63 aa9.45□□□□□ -0.9
DDX39A-220ENST00000593008 TDRD6O60522 2096 aaKnown RBP9.44□□□□□ -0.9
DDX39A-220ENST00000593008 PIKFYVEQ9Y2I7 2098 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 MAP1BP46821 2468 aaKnown RBP9.44□□□□□ -0.9
DDX39A-220ENST00000593008 A6NCN8 305 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 OR52A4PA6NMU1 304 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 LMO7DNF2Z398 122 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 RFPL1O75677 317 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 AP2A2O94973 939 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 TSPAN12O95859 305 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 TNFP01375 233 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 ESR1P03372 595 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 OR56A5P0C7T3 313 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 RALBP11234 206 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 CKMT1AP12532 417 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 BRAFP15056 766 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 CREB1P16220 341 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 CHRM3P20309 590 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 KELP23276 732 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 ACP1P24666 158 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 AOAHP28039 575 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 ACTR1BP42025 376 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 BDKRB1P46663 353 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 CSRP3P50461 194 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 BLKP51451 505 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 ACTR1AP61163 376 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 IFFO1Q0D2I5 559 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 HSPA14Q0VDF9 509 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 NAB1Q13506 487 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 USP10Q14694 798 aaKnown RBP9.44□□□□□ -0.9
DDX39A-220ENST00000593008 ZKSCAN8Q15776 578 aaPredicted RBP9.44□□□□□ -0.9
DDX39A-220ENST00000593008 SYTL3Q4VX76 610 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 GRTP1Q5TC63 336 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 HES3Q5TGS1 186 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 ZCCHC8Q6NZY4 707 aaKnown RBP9.44□□□□□ -0.9
DDX39A-220ENST00000593008 GUSBP11Q6P575 273 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 ADGRD1Q6QNK2 874 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 PAQR3Q6TCH7 311 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 GALNT7Q86SF2 657 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 CFAP206Q8IYR0 622 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 PLD6Q8N2A8 252 aaKnown RBP9.44□□□□□ -0.9
DDX39A-220ENST00000593008 GALNT15Q8N3T1 639 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 ZBTB2Q8N680 514 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 IFI44Q8TCB0 444 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 CCM2Q9BSQ5 444 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 DUSP23Q9BVJ7 150 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 WWP1Q9H0M0 922 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 PCMTD2Q9NV79 361 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 ZNF358Q9NW07 568 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 TXNDC16Q9P2K2 825 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 PCDHGA1Q9Y5H4 931 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 CSNK1G3Q9Y6M4 447 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 DGKBQ9Y6T7 804 aa9.44□□□□□ -0.9
DDX39A-220ENST00000593008 ARID1BQ8NFD5 2236 aaPredicted RBP9.44□□□□□ -0.9
DDX39A-220ENST00000593008 SLC5A10A0PJK1 596 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 FAM221BA6H8Z2 402 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 NPEPPSL1A6NEC2 478 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 B4DGG1 531 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 E5RI56 91 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 TNFRSF10CO14798 259 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 KMOO15229 486 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 PROS1P07225 676 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 SLC35E2BP0CK96 405 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 JUPP14923 745 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 SPRP35270 261 aaPredicted RBP9.43□□□□□ -0.9
DDX39A-220ENST00000593008 MAGEA12P43365 314 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 CLCNKAP51800 687 aa9.43□□□□□ -0.9
DDX39A-220ENST00000593008 ADARP55265 1226 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms