RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 PCBD2Q9H0N5 130 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 WDR26Q9H7D7 661 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 CAB39LQ9H9S4 337 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 EIF2B3Q9NR50 452 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 IL36AQ9UHA7 158 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 WNT9AO14904 365 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 ADAMTS3O15072 1205 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 NPHS1O60500 1241 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 GALTP07902 379 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 HNRNPA1P09651 372 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 S100GP29377 79 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 ACTR1BP42025 376 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 CDH13P55290 713 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 TAS2R41P59536 307 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 ACTR1AP61163 376 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 MINDY4Q4G0A6 757 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 ATXN7L2Q5T6C5 722 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 FBXO42Q6P3S6 717 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 MMAAQ8IVH4 418 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 DNAJB8Q8NHS0 232 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 TWIST2Q8WVJ9 160 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 TBATAQ96M53 351 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 RAB11FIP5Q9BXF6 653 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 NUSAP1Q9BXS6 441 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 SUV39H2Q9H5I1 410 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 GDAP2Q9NXN4 497 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 ZNF221Q9UK13 617 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 R3HDM2Q9Y2K5 976 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 TRPM3Q9HCF6 1732 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 ALS2Q96Q42 1657 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 RNF225M0QZC1 329 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 FABP3P05413 133 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 NAE1Q13564 534 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 ZZZ3Q8IYH5 903 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 SLC34A3Q8N130 599 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 FAR1Q8WVX9 515 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 PPP1R14BQ96C90 147 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 C1QTNF1Q9BXJ1 281 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 WRAP73Q9P2S5 460 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 DNAJB4Q9UDY4 337 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 STK16O75716 305 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 TBX18O95935 607 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 ZNF12P17014 697 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 NDUFS1P28331 727 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 LCP2Q13094 533 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 GDPD4Q6W3E5 623 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 BEND5Q7L4P6 421 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 OTUB2Q96DC9 234 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 NUS1Q96E22 293 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 CIB1Q99828 191 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 DKK3Q9UBP4 350 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 HMGXB4Q9UGU5 601 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 PEX16Q9Y5Y5 336 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 WNT6Q9Y6F9 365 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 STX16-NPEPL1H3BU86 382 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 STX16O14662 325 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 RB1P06400 928 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 PSMA1P25786 263 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 MAGEA11P43364 429 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 RABGGTBP53611 331 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 SERPINA9Q86WD7 417 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 MCEMP1Q8IX19 187 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 UNC5BQ8IZJ1 945 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 RASSF5Q8WWW0 418 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 CCDC59Q9P031 241 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 SCML2Q9UQR0 700 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 LRP6O75581 1613 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 MTMR11A4FU01 709 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 MATN2O00339 956 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 PITPNM1O00562 1244 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 PMM2O15305 246 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 PLIN3O60664 434 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 NOL4O94818 638 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 MASP1P48740 699 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 IRF5Q13568 498 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 CCNYL2Q5T2Q4 361 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 PIK3R6Q5UE93 754 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 MSANTD2Q6P1R3 559 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 ENPP7Q6UWV6 458 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 OLFML1Q6UWY5 402 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 DAW1Q8N136 415 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 PYROXD2Q8N2H3 581 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 DENND2DQ9H6A0 471 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 CCSER2Q9H7U1 834 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 TCAF1Q9Y4C2 921 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 ADAMDEC1O15204 470 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 FADS2O95864 444 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 UROSP10746 265 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 IGFALSP35858 605 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 NSG1P42857 185 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 PUDPQ08623 228 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 ZFP69Q49AA0 526 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 REP15Q6BDI9 236 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 AMZ2Q86W34 360 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 SPPL2CQ8IUH8 684 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 SIAH1Q8IUQ4 282 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 SPATA6LQ8N4H0 392 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 TRPV3Q8NET8 790 aa13.12□□□□□ -0.31
SMARCA4-216ENST00000591545 SLC2A4RGQ9NR83 387 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms