RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 C12orf66Q96MD2 445 aa12.39□□□□□ -0.43
PRKCSH-210ENST00000589990 ADGRE3Q9BY15 652 aa12.39□□□□□ -0.43
PRKCSH-210ENST00000589990 TRIM8Q9BZR9 551 aa12.39□□□□□ -0.43
PRKCSH-210ENST00000589990 HAUS4Q9H6D7 363 aa12.39□□□□□ -0.43
PRKCSH-210ENST00000589990 MAGEE1Q9HCI5 957 aa12.39□□□□□ -0.43
PRKCSH-210ENST00000589990 AMACRQ9UHK6 382 aa12.39□□□□□ -0.43
PRKCSH-210ENST00000589990 POMT2Q9UKY4 750 aa12.39□□□□□ -0.43
PRKCSH-210ENST00000589990 DNHD1Q96M86 4753 aa12.39□□□□□ -0.43
PRKCSH-210ENST00000589990 ANKRD12Q6UB98 2062 aa12.39□□□□□ -0.43
PRKCSH-210ENST00000589990 PCNX1Q96RV3 2341 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 SMTNL1A8MU46 457 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 C9J4A7 227 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 BTN3A3O00478 584 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 HLA-DPA1P20036 260 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 GJC1P36383 396 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 GTF2H3Q13889 308 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 SSPNQ14714 243 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 DEFB110Q30KQ9 67 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 METRNLQ641Q3 311 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 ARMC6Q6NXE6 501 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 CDHR3Q6ZTQ4 885 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 DET1Q7L5Y6 550 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 SPATA22Q8NHS9 363 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 FATE1Q969F0 183 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 CNDP1Q96KN2 507 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 RMDN2Q96LZ7 410 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 ERGIC2Q96RQ1 377 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 SLX1AQ9BQ83 275 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 SPRTNQ9H040 489 aaPredicted RBP12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 KIR3DX1Q9H7L2 352 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 FANCEQ9HB96 536 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 FAM60AQ9NP50 221 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 IL26Q9NPH9 171 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 PADI2Q9Y2J8 665 aa12.38□□□□□ -0.43
PRKCSH-210ENST00000589990 A0A1W2PQJ5 194 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 HEATR9A2RTY3 570 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 GSAPA4D1B5 854 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 LRRC53A6NM62 1247 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 E7EQ34 232 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 H3BMH7 237 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 PEX12O00623 359 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 BUD23O43709 281 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 MT-CYBP00156 380 aaPredicted RBP12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 PRDX3P30048 256 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 HADHAP40939 763 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 FOLR3P41439 243 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 SOX8P57073 446 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 CDC16Q13042 620 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 ART3Q13508 389 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 FNBP1LQ5T0N5 605 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 FAM151BQ6UXP7 276 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 CCNYQ8ND76 341 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 CATSPER1Q8NEC5 780 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 DNAJB14Q8TBM8 379 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 PPP4R1Q8TF05 950 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 TM9SF4Q92544 642 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 IMP4Q96G21 291 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 GBP5Q96PP8 586 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 BPIFA3Q9BQP9 254 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 MESP1Q9BRJ9 268 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 SLC7A5P2Q9GIP4 190 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 DEF6Q9H4E7 631 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 SLC6A20Q9NP91 592 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 C1GALT1Q9NS00 363 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 DHCR7Q9UBM7 475 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 LIMA1Q9UHB6 759 aaKnown RBP12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 SCINQ9Y6U3 715 aa12.37□□□□□ -0.43
PRKCSH-210ENST00000589990 A0A1B0GUH1 482 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 BTN3A1O00481 513 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 GAPDHSO14556 408 aaPredicted RBP12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 IPO13O94829 963 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 POLBP06746 335 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 TPM2P07951 284 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 GZMAP12544 262 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 SKILP12757 684 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 AGXTP21549 392 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 HTR1EP28566 365 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 TSFMP43897 325 aaKnown RBP12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 ADCY2Q08462 1091 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 PTPRCAPQ14761 206 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 ZNF169Q14929 603 aaPredicted RBP12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 GPRC6AQ5T6X5 926 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 IGFL2Q6UWQ7 119 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 DAAM2Q86T65 1068 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 TRIM73Q86UV7 250 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 NT5DC3Q86UY8 548 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 PARP9Q8IXQ6 854 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 NXPE1Q8N323 547 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 ANKRD20A12PQ8NF67 263 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 OR2Y1Q8NGV0 311 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 RELTQ969Z4 430 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 TADA1Q96BN2 335 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 HDAC11Q96DB2 347 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 CCDC120Q96HB5 630 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 TTC25Q96NG3 672 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 AGAP3Q96P47 875 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 DHRS4Q9BTZ2 278 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 PITPNM3Q9BZ71 974 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 HSD3B7Q9H2F3 369 aa12.36□□□□□ -0.43
PRKCSH-210ENST00000589990 ATP13A2Q9NQ11 1180 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms