RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 ADRM1Q16186 407 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 INTS11Q5TA45 600 aaKnown RBP18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 LRRC66Q68CR7 880 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 NANOGP8Q6NSW7 305 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 TRPV3Q8NET8 790 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 SPATA16Q9BXB7 569 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 NANOGQ9H9S0 305 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 ZMYM5Q9UJ78 669 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 PIKFYVEQ9Y2I7 2098 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 A8MX80 341 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 ARHGEF15O94989 841 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 CSF2RAP15509 400 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 JAK1P23458 1154 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 DDX6P26196 483 aaKnown RBP eCLIP18.82■□□□□ 0.66e-7■□□□□ 8.8
PRKCSH-209ENST00000589838 CTSOP43234 321 aaPredicted RBP18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 STK19P49842 368 aaPredicted RBP18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 PHKG1Q16816 387 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 CIB1Q99828 191 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 C9orf16Q9BUW7 83 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 SLC29A3Q9BZD2 475 aa18.82■□□□□ 0.6
PRKCSH-209ENST00000589838 C7orf72A4D263 438 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 MAP3K13O43283 966 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 ULK1O75385 1050 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 SMIM18P0DKX4 95 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 G6PDP11413 515 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 SLC2A4P14672 509 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 GJA1P17302 382 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 HLA-FP30511 346 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 CREB5Q02930 508 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 DMC1Q14565 340 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 FUT11Q495W5 492 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 RABL3Q5HYI8 236 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 IFNEQ86WN2 208 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 CHERPQ8IWX8 916 aaKnown RBP18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 KIAA2013Q8IYS2 634 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 ADGRG5Q8IZF4 528 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 TCAIMQ8N3R3 496 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 CENPNQ96H22 339 aaPredicted RBP18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 TMEM79Q9BSE2 394 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 AGPAT4Q9NRZ5 378 aa18.81■□□□□ 0.6
PRKCSH-209ENST00000589838 BNIP3LO60238 219 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 STK16O75716 305 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 PCSK2P16519 638 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 CCNHP51946 323 aaPredicted RBP18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 SH3BGRP55822 239 aaPredicted RBP18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 MYBPC1Q00872 1141 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 PTSQ03393 145 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 CYP51A1Q16850 503 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 CACHD1Q5VU97 1274 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 SLC30A9Q6PML9 568 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 TRIM46Q7Z4K8 759 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 TBC1D21Q8IYX1 336 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 AADATQ8N5Z0 425 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 GLB1L3Q8NCI6 653 aaPredicted RBP18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 ZDHHC6Q9H6R6 413 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 PAPOLBQ9NRJ5 636 aaKnown RBP18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 ANAPC2Q9UJX6 822 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 CCL27Q9Y4X3 112 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 POLR3HQ9Y535 204 aaPredicted RBP18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 PABPN1LA6NDY0 278 aaKnown RBP18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 INPP4BO15327 924 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 VARSP26640 1264 aaKnown RBP18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 GRIA2P42262 883 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 GNPDA1P46926 289 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 POLE2P56282 527 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 PWP1Q13610 501 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 MAP7Q14244 749 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 IMPG1Q17R60 797 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 HABP4Q5JVS0 413 aaKnown RBP18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 PLPP6Q8IY26 295 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 MFSD2AQ8NA29 543 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 PAPD5Q8NDF8 572 aaKnown RBP18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 SLC29A1Q99808 456 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 BRD9Q9H8M2 597 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 ASIC5Q9NY37 505 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 PKD2L2Q9NZM6 624 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 MAGEL2Q9UJ55 1249 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 SLC4A7Q9Y6M7 1214 aa18.8■□□□□ 0.6
PRKCSH-209ENST00000589838 PLXNB3Q9ULL4 1909 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 IGLV3-16A0A075B6K0 115 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 ANKRD28O15084 1053 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 KRT6AP02538 564 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 KRT6BP04259 564 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 C8GP07360 202 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 C7P10643 843 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 PABPC1P11940 636 aaKnown RBP18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 NFKBIAP25963 317 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 RECQLP46063 649 aaPredicted RBP18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 KRT6CP48668 564 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 ARHGEF7Q14155 803 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 FXNQ16595 210 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 CNPY1Q3B7I2 92 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 ATP13A5Q4VNC0 1218 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 RFTN2Q52LD8 501 aaPredicted RBP18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 ARHGAP15Q53QZ3 475 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 IYDQ6PHW0 289 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 SLC2A7Q6PXP3 512 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 DIS3LQ8TF46 1054 aaKnown RBP18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 HAUS8Q9BT25 410 aa18.79■□□□□ 0.6
PRKCSH-209ENST00000589838 SLC32A1Q9H598 525 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms