RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 GORASP1Q9BQQ3 440 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 CHST8Q9H2A9 424 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 TSPY26PQ9H489 355 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 KCND1Q9NSA2 647 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 SEMA5BQ9P283 1151 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 ACSL5Q9ULC5 683 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 FARSAQ9Y285 508 aaKnown RBP13.35□□□□□ -0.27
HDAC5-208ENST00000588419 COLEC10Q9Y6Z7 277 aa13.35□□□□□ -0.27
HDAC5-208ENST00000588419 NUP210LQ5VU65 1888 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 APOC4-APOC2K7ER74 178 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 KCNN4O15554 427 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 STK10O94804 968 aaKnown RBP13.34□□□□□ -0.27
HDAC5-208ENST00000588419 APOC2P02655 101 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 GP1BBP13224 206 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 ITGALP20701 1170 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 CYP2A7P20853 494 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 GNLYP22749 145 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 NDUFS1P28331 727 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 LMAN1P49257 510 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 NAP1L1P55209 391 aaKnown RBP13.34□□□□□ -0.27
HDAC5-208ENST00000588419 OTUD4Q01804 1114 aaKnown RBP13.34□□□□□ -0.27
HDAC5-208ENST00000588419 ABRQ12979 859 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 SPARCL1Q14515 664 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 BCL7AQ4VC05 210 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 BBS12Q6ZW61 710 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 BPHLQ86WA6 291 aaPredicted RBP13.34□□□□□ -0.27
HDAC5-208ENST00000588419 CDKL3Q8IVW4 592 aaPredicted RBP13.34□□□□□ -0.27
HDAC5-208ENST00000588419 APLFQ8IW19 511 aaPredicted RBP13.34□□□□□ -0.27
HDAC5-208ENST00000588419 CPT1CQ8TCG5 803 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 HM13Q8TCT9 377 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 DTX3LQ8TDB6 740 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 LCN9Q8WX39 176 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 THAP4Q8WY91 577 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 CPT1BQ92523 772 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 FCRL4Q96PJ5 515 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 NRTNQ99748 197 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 HGH1Q9BTY7 390 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 GPR87Q9BY21 358 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 ING2Q9H160 280 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 SRMSQ9H3Y6 488 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 LRRC4CQ9HCJ2 640 aa13.34□□□□□ -0.27
HDAC5-208ENST00000588419 CCDC66A2RUB6 948 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 A6NL46 340 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 CFAP99D6REC4 459 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 IFRD1O00458 451 aaPredicted RBP13.33□□□□□ -0.28
HDAC5-208ENST00000588419 AGFG2O95081 481 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 CRTAMO95727 393 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 PVRP15151 417 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 PTMSP20962 102 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 PREPP48147 710 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 PRLHRP49683 370 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 GSDMDP57764 484 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 EIF3EP60228 445 aaKnown RBP13.33□□□□□ -0.28
HDAC5-208ENST00000588419 RAPSNQ13702 412 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 PTCHD3Q3KNS1 767 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 ZRANB3Q5FWF4 1079 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 ANKRD20A2Q5SQ80 823 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 ANKRD20A1Q5TYW2 823 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 ANKRD20A3Q5VUR7 823 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 LCN10Q6JVE6 187 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 DARS2Q6PI48 645 aaKnown RBP13.33□□□□□ -0.28
HDAC5-208ENST00000588419 SLC38A9Q8NBW4 561 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 ACVR1CQ8NER5 493 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 CCDC110Q8TBZ0 833 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 ACTL9Q8TC94 416 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 ULK4Q96C45 1275 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 COPS8Q99627 209 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 TBL1YQ9BQ87 522 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 MFRPQ9BY79 579 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 XKR8Q9H6D3 395 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 ACTR5Q9H9F9 607 aaPredicted RBP13.33□□□□□ -0.28
HDAC5-208ENST00000588419 POMT2Q9UKY4 750 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 HEBP2Q9Y5Z4 205 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 ESPL1Q14674 2120 aa13.33□□□□□ -0.28
HDAC5-208ENST00000588419 CCDC78A2IDD5 438 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 C5orf60A6NFR6 353 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 BTN3A1O00481 513 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 ZNF185O15231 689 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 MAP3K7O43318 606 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 SGTAO43765 313 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 PTMAP06454 111 aaKnown RBP13.32□□□□□ -0.28
HDAC5-208ENST00000588419 PRSS56P0CW18 603 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 RBP3P10745 1247 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 ATP1B2P14415 290 aaPredicted RBP13.32□□□□□ -0.28
HDAC5-208ENST00000588419 ST6GAL1P15907 406 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 MC4RP32245 332 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 CD97P48960 835 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 XIAPP98170 497 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 PRKG2Q13237 762 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 TCEAL1Q15170 157 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 SPA17Q15506 151 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 KYNUQ16719 465 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 HIST2H2BCQ6DN03 193 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 C11orf63Q6NUN7 778 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 TAS2R42Q7RTR8 314 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 HOOK3Q86VS8 718 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 SYTL1Q8IYJ3 562 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 DSELQ8IZU8 1212 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 NXPE1Q8N323 547 aa13.32□□□□□ -0.28
HDAC5-208ENST00000588419 PHC3Q8NDX5 983 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms