RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 RPIAP49247 311 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 SERPINB8P50452 374 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 RAB10P61026 200 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 BIRC2Q13490 618 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 KIR2DS5Q14953 304 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 ACSBG2Q5FVE4 666 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 STPG1Q5TH74 334 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 LRRC8EQ6NSJ5 796 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 IYDQ6PHW0 289 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 PAQR3Q6TCH7 311 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 XKR5Q6UX68 686 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 DBX2Q6ZNG2 339 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 RAPH1Q70E73 1250 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 PDZD3Q86UT5 571 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 TDRPQ86YL5 185 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 TRIM48Q8IWZ4 208 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 CPNE9Q8IYJ1 553 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 KIAA2013Q8IYS2 634 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 SLC22A15Q8IZD6 547 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 RIBC1Q8N443 379 aaPredicted RBP13.33□□□□□ -0.28
VMP1-203ENST00000586245 ARL10Q8N8L6 244 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 GIMAP7Q8NHV1 300 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 EPS8L3Q8TE67 593 aaKnown RBP13.33□□□□□ -0.28
VMP1-203ENST00000586245 C12orf66Q96MD2 445 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 STN1Q9H668 368 aaKnown RBP13.33□□□□□ -0.28
VMP1-203ENST00000586245 GPAMQ9HCL2 828 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 EVA1BQ9NVM1 165 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 NCKIPSDQ9NZQ3 722 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 TBK1Q9UHD2 729 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 CDYLQ9Y232 598 aa13.33□□□□□ -0.28
VMP1-203ENST00000586245 PIKFYVEQ9Y2I7 2098 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 TRBV23OR9-2A0A075B6M9 112 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 A6NCN8 305 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 TRIM49D1C9J1S8 452 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 EIF3FO00303 357 aaPredicted RBP13.32□□□□□ -0.28
VMP1-203ENST00000586245 TRIM38O00635 465 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 CDH16O75309 829 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 EML2O95834 649 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 CD59P13987 128 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 BRAFP15056 766 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 TYK2P29597 1187 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 LIMK1P53667 647 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 IL2P60568 153 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 TIAL1Q01085 375 aaKnown RBP eCLIP13.32□□□□□ -0.28
VMP1-203ENST00000586245 DNAJC3Q13217 504 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 KRT33BQ14525 404 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 GBX1Q14549 363 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 CLCA4Q14CN2 919 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 RASA2Q15283 850 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 TAF1BQ53T94 588 aaPredicted RBP13.32□□□□□ -0.28
VMP1-203ENST00000586245 CAPRIN2Q6IMN6 1127 aaKnown RBP13.32□□□□□ -0.28
VMP1-203ENST00000586245 OGFOD3Q6PK18 319 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 SLC9B2Q86UD5 537 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 VRK3Q8IV63 474 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 CEP97Q8IW35 865 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 NAXDQ8IW45 347 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 NAGSQ8N159 534 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 MYO1HQ8N1T3 1032 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 NKAPQ8N5F7 415 aaKnown RBP13.32□□□□□ -0.28
VMP1-203ENST00000586245 AVL9Q8NBF6 648 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 MAPK15Q8TD08 544 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 RHBDD1Q8TEB9 315 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 CXorf40BQ96DE9 158 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 RMDN2Q96LZ7 410 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 FOPNLQ96NB1 174 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 OR52A5Q9H2C5 316 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 IMP3Q9NV31 184 aaKnown RBP13.32□□□□□ -0.28
VMP1-203ENST00000586245 TSR3Q9UJK0 312 aaKnown RBP13.32□□□□□ -0.28
VMP1-203ENST00000586245 TLK1Q9UKI8 766 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 WDR37Q9Y2I8 494 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 HEBP2Q9Y5Z4 205 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 FRYLO94915 3013 aa13.32□□□□□ -0.28
VMP1-203ENST00000586245 ZFHX2Q9C0A1 2572 aaPredicted RBP13.31□□□□□ -0.28
VMP1-203ENST00000586245 HMX2A2RU54 273 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 OR52A4PA6NMU1 304 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 PHGDHO43175 533 aaKnown RBP13.31□□□□□ -0.28
VMP1-203ENST00000586245 SIGLEC6O43699 453 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 SH3BP5O60239 455 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 NOBOXO60393 691 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 LDOC1O95751 146 aaPredicted RBP13.31□□□□□ -0.28
VMP1-203ENST00000586245 VIPP01282 170 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 RPN2P04844 631 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 MPC1LP0DKB6 136 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 MTHFD1P11586 935 aaKnown RBP13.31□□□□□ -0.28
VMP1-203ENST00000586245 ZNF37AP17032 561 aaPredicted RBP13.31□□□□□ -0.28
VMP1-203ENST00000586245 NDUFS1P28331 727 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 MAPK9P45984 424 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 PGGT1BP53609 377 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 DAB2P98082 770 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 ABRQ12979 859 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 ZNF460Q14592 562 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 CASP8Q14790 479 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 NR0B2Q15466 257 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 ZKSCAN8Q15776 578 aaPredicted RBP13.31□□□□□ -0.28
VMP1-203ENST00000586245 RPE65Q16518 533 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 KRT71Q3SY84 523 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 C14orf28Q4W4Y0 310 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 FBXO38Q6PIJ6 1188 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 LRIG3Q6UXM1 1119 aa13.31□□□□□ -0.28
VMP1-203ENST00000586245 NEK10Q6ZWH5 1172 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms