RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 C9P02748 559 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 CTAGE8P0CG41 777 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 PRSS56P0CW18 603 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 AMD1P17707 334 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 ATP5DP30049 168 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 PPM1FP49593 454 aaPredicted RBP13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 RAB15P59190 212 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 GPR18Q14330 331 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 KRT33BQ14525 404 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 CRYMQ14894 314 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 PLCL1Q15111 1095 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 TBC1D25Q3MII6 688 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 PLEKHS1Q5SXH7 462 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 TMEM164Q5U3C3 297 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 PTRHD1Q6GMV3 140 aaKnown RBP13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 C8orf74Q6P047 294 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 CLEC14AQ86T13 490 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 CTAGE6Q86UF2 777 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 KMT5CQ86Y97 462 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 CTAGE4Q8IX94 777 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 TBC1D21Q8IYX1 336 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 AGGF1Q8N302 714 aaeCLIP13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 FBXO39Q8N4B4 442 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 CLDN19Q8N6F1 224 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 AGBL5Q8NDL9 886 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 GSDMBQ8TAX9 411 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 ATXN7L3BQ96GX2 97 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 RMDN2Q96LZ7 410 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 PWWP2AQ96N64 755 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 CNTNAP3BQ96NU0 1288 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 INSM2Q96T92 566 aaPredicted RBP13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 TRIM56Q9BRZ2 755 aaKnown RBP13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 CNTNAP3Q9BZ76 1288 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 P2RY12Q9H244 342 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 CCDC68Q9H2F9 335 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 ACSL6Q9UKU0 697 aa13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 CORO1CQ9ULV4 474 aaPredicted RBP13.49□□□□□ -0.25
PRKCSH-202ENST00000585540 TPRP12270 2363 aaKnown RBP13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 TRBV23OR9-2A0A075B6M9 112 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 IGHV5-10-1A0A0J9YXX1 117 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 E7ESA3 106 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 GPC4O75487 556 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 BANF1O75531 89 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 CAPNS1P04632 268 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 JMJD7P0C870 316 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 CSF2RBP32927 897 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 CSTF2P33240 577 aaKnown RBP eCLIP13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 SLC7A5Q01650 507 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 DHX9Q08211 1270 aaKnown RBP13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 PRKAA1Q13131 559 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 SEMA3AQ14563 771 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 TTLL9Q3SXZ7 439 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 C3orf38Q5JPI3 329 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 PHF19Q5T6S3 580 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 DUPD1Q68J44 220 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 ZNF470Q6ECI4 717 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 LRRC8EQ6NSJ5 796 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 CES3Q6UWW8 571 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 XKR5Q6UX68 686 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 UNC5DQ6UXZ4 953 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 CEP128Q6ZU80 1094 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 CENPUQ71F23 418 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 PRSS42Q7Z5A4 293 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 KCNMB4Q86W47 210 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 CNTN4Q8IWV2 1026 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 SLC22A15Q8IZD6 547 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 MMGT1Q8N4V1 131 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 CEP112Q8N8E3 955 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 MAGEC3Q8TD91 643 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 UBXN4Q92575 508 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 LPGAT1Q92604 370 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 TFGQ92734 400 aaPredicted RBP13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 KCNJ9Q92806 393 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 CCDC74BQ96LY2 380 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 TEFMQ96QE5 360 aaKnown RBP13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 NUDT22Q9BRQ3 303 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 ZPBPQ9BS86 351 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 LRRC1Q9BTT6 524 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 RAB11FIP5Q9BXF6 653 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 TFB2MQ9H5Q4 396 aaKnown RBP13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 LATS2Q9NRM7 1088 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 C20orf96Q9NUD7 363 aaPredicted RBP13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 NSMCE4AQ9NXX6 385 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 SEMA5BQ9P283 1151 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 MARCH4Q9P2E8 410 aaPredicted RBP13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 ATXN7L1Q9ULK2 861 aaPredicted RBP13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 PSMD13Q9UNM6 376 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 SATB2Q9UPW6 733 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 LOXL2Q9Y4K0 774 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 PRSS21Q9Y6M0 314 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 ACACBO00763 2458 aa13.48□□□□□ -0.25
PRKCSH-202ENST00000585540 CDRT15L2A8MXV6 281 aa13.47□□□□□ -0.25
PRKCSH-202ENST00000585540 B4E171 279 aa13.47□□□□□ -0.25
PRKCSH-202ENST00000585540 EIF3FO00303 357 aaPredicted RBP13.47□□□□□ -0.25
PRKCSH-202ENST00000585540 OR1I1O60431 355 aa13.47□□□□□ -0.25
PRKCSH-202ENST00000585540 BRINP1O60477 761 aa13.47□□□□□ -0.25
PRKCSH-202ENST00000585540 SLCO2B1O94956 709 aa13.47□□□□□ -0.25
PRKCSH-202ENST00000585540 PKMP14618 531 aaKnown RBP13.47□□□□□ -0.25
PRKCSH-202ENST00000585540 TSPAN7P41732 249 aa13.47□□□□□ -0.25
PRKCSH-202ENST00000585540 CLDN6P56747 220 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms