RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 COLEC10Q9Y6Z7 277 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 LAMA1P25391 3075 aa14.27□□□□□ -0.12
SCAMP4-209ENST00000585335 TRBV23OR9-2A0A075B6M9 112 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 POC1B-GALNT4F8VUJ3 575 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 EIF3FO00303 357 aaPredicted RBP14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 KDM1AO60341 852 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 NOBOXO60393 691 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 CBFA2T3O75081 653 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 GPC4O75487 556 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 SLCO2B1O94956 709 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 C1QAP02745 245 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 CBSLP0DN79 551 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 MTHFD1P11586 935 aaKnown RBP14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 CKMT1AP12532 417 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 ENO3P13929 434 aaPredicted RBP14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 GLB1P16278 677 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 SAT1P21673 171 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 CNTFP26441 200 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 NDUFS1P28331 727 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 CBSP35520 551 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 CLCN7P51798 805 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 HHEXQ03014 270 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 NAA30Q147X3 362 aaPredicted RBP14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 RBM20Q5T481 1227 aaKnown RBP14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 LGSNQ5TDP6 509 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 ARL14Q8N4G2 192 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 SIDT2Q8NBJ9 832 aaKnown RBP14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 DEFB124Q8NES8 71 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 BAHD1Q8TBE0 780 aaPredicted RBP14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 SLC44A1Q8WWI5 657 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 CAMK1GQ96NX5 476 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 PAFAH2Q99487 392 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 GPR22Q99680 433 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 OR52A5Q9H2C5 316 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 IMP3Q9NV31 184 aaKnown RBP14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 CPNE7Q9UBL6 633 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 FETUBQ9UGM5 382 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 SLC39A10Q9ULF5 831 aa14.27□□□□□ -0.13
SCAMP4-209ENST00000585335 CPED1A4D0V7 1026 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 NUDT21O43809 227 aaKnown RBP14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 KRT38O76015 456 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 EML2O95834 649 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 CEACAM1P13688 526 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 BRAFP15056 766 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 XRCC1P18887 633 aaPredicted RBP14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 FDXRP22570 491 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 HSD17B3P37058 310 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 FASLGP48023 281 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 CDKN2DP55273 166 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 MAZP56270 477 aaKnown RBP14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 USP10Q14694 798 aaKnown RBP14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 TRIP6Q15654 476 aaKnown RBP14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 RPE65Q16518 533 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 UBAP2Q5T6F2 1119 aaKnown RBP14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 CAPRIN2Q6IMN6 1127 aaKnown RBP14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 TTC23LQ6PF05 361 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 NAPRTQ6XQN6 538 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 NEK10Q6ZWH5 1172 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 GLRX5Q86SX6 157 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 C17orf82Q86X59 251 aaPredicted RBP14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 LILRA3Q8N6C8 439 aaPredicted RBP14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 MYRIPQ8NFW9 859 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 CD200R1Q8TD46 325 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 PATE1Q8WXA2 126 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 TFGQ92734 400 aaPredicted RBP14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 RMDN2Q96LZ7 410 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 MVB12BQ9H7P6 319 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 POPDC3Q9HBV1 291 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 LRIT1Q9P2V4 623 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 ZNF180Q9UJW8 692 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 WDR37Q9Y2I8 494 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 USP34Q70CQ2 3546 aa14.26□□□□□ -0.13
SCAMP4-209ENST00000585335 PTPRZ1P23471 2315 aaPredicted RBP14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 ASCC3Q8N3C0 2202 aaKnown RBP14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 EME2A4GXA9 379 aaPredicted RBP14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 CCDC151A5D8V7 595 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 PABPN1LA6NDY0 278 aaKnown RBP14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 OR52A4PA6NMU1 304 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 KRT37O76014 449 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 GP1BAP07359 652 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 ITGA2BP08514 1039 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 CDK4P11802 303 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 PNLIPP16233 465 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 STMN1P16949 149 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 ACP1P24666 158 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 PDHA2P29803 388 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 PPM1FP49593 454 aaPredicted RBP14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 NOVA1P51513 510 aaKnown RBP14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 IL2P60568 153 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 UBE2IP63279 158 aaKnown RBP14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 IFFO1Q0D2I5 559 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 ILKQ13418 452 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 CLCA4Q14CN2 919 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 UNC5DQ6UXZ4 953 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 EFL1Q7Z2Z2 1120 aaKnown RBP14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 PIM3Q86V86 326 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 MYO1HQ8N1T3 1032 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 MREGQ8N565 214 aa14.25□□□□□ -0.13
SCAMP4-209ENST00000585335 NKAPQ8N5F7 415 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms