RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	RAB40AL	P0C0E4	278 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	ST6GAL1	P15907	406 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	PECAM1	P16284	738 aa	Predicted RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	RORA	P35398	523 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	RRAD	P55042	308 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	FANCC	Q00597	558 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	ITGA9	Q13797	1035 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	ELOA	Q14241	798 aa	Known RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	NCF4	Q15080	339 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	PRKD1	Q15139	912 aa	Predicted RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	DEFB110	Q30KQ9	67 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	PLEKHN1	Q494U1	663 aa	Predicted RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	C1orf189	Q5VU69	101 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	MLIP	Q5VWP3	458 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	ZDHHC20	Q5W0Z9	365 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	METRNL	Q641Q3	311 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	KAZN	Q674X7	775 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	KDELC1	Q6UW63	502 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	ZNF517	Q6ZMY9	492 aa	Predicted RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	MICALCL	Q6ZW33	695 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	LUZP1	Q86V48	1076 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	ZC3H18	Q86VM9	953 aa	Known RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	RAB43	Q86YS6	212 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	SRRM1	Q8IYB3	904 aa	Known RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	IQCK	Q8N0W5	287 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	TMEM102	Q8N9M5	508 aa	Predicted RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	OR8K5	Q8NH50	307 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	ZNF398	Q8TD17	642 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	LCN9	Q8WX39	176 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	SYN2	Q92777	582 aa	Predicted RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	OXNAD1	Q96HP4	312 aa	Predicted RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	MRGPRX2	Q96LB1	330 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	TEKT5	Q96M29	485 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	C5orf34	Q96MH7	638 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	FERD3L	Q96RJ6	166 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	SRPK1	Q96SB4	655 aa	Known RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	FSD1L	Q9BXM9	530 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	SRMS	Q9H3Y6	488 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	KIR3DX1	Q9H7L2	352 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	FKBPL	Q9UIM3	349 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	NENF	Q9UMX5	172 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	LUC7L2	Q9Y383	392 aa	Known RBP	9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	ARL5A	Q9Y689	179 aa		9.35	□□□□□ -0.91
MSI2-208	ENST00000579466	NUP210L	Q5VU65	1888 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	ANKUB1	A6NFN9	424 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	MGAT4D	A6NG13	374 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466		E7EQ34	232 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	BTN3A3	O00478	584 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	BTN3A1	O00481	513 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	ZNF749	O43361	778 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	CAPN1	P07384	714 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	PBX1	P40424	430 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	GLRB	P48167	497 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	UBASH3A	P57075	661 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	TMPRSS15	P98073	1019 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	WASHC5	Q12768	1159 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	OLIG2	Q13516	323 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	IQCB1	Q15051	598 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	SLC14A2	Q15849	920 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	ZNF789	Q5FWF6	425 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	CAVIN1	Q6NZI2	390 aa	Known RBP	9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	MFSD7	Q6UXD7	560 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	MED25	Q71SY5	747 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	PID1	Q7Z2X4	250 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	MRGPRE	Q86SM8	312 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	TRIM73	Q86UV7	250 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	CFAP206	Q8IYR0	622 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	OR2L2	Q8NH16	312 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	SLC35G2	Q8TBE7	412 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	TFB1M	Q8WVM0	346 aa	Known RBP	9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	N4BP2L2	Q92802	583 aa	Predicted RBP	9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	RBM41	Q96IZ5	413 aa	Known RBP	9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	LRFN5	Q96NI6	719 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	RANBP9	Q96S59	729 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	SMAD5	Q99717	465 aa	Known RBP	9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	APOL2	Q9BQE5	337 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	HGH1	Q9BTY7	390 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	FICD	Q9BVA6	458 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	TRABD	Q9H4I3	376 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	FAM96A	Q9H5X1	160 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	XKR8	Q9H6D3	395 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	ASB8	Q9H765	288 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	LATS2	Q9NRM7	1088 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	C1GALT1	Q9NS00	363 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	IRAK4	Q9NWZ3	460 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	RSPH14	Q9UHP6	348 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	CRLS1	Q9UJA2	301 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	CAPN11	Q9UMQ6	739 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	SLC5A6	Q9Y289	635 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	PADI2	Q9Y2J8	665 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	PTRH2	Q9Y3E5	179 aa	Known RBP	9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	PCDHGB7	Q9Y5F8	929 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	COLEC10	Q9Y6Z7	277 aa		9.34	□□□□□ -0.91
MSI2-208	ENST00000579466	LOC285095	A0A1B0GVY8	99 aa		9.33	□□□□□ -0.92
MSI2-208	ENST00000579466	CCDC66	A2RUB6	948 aa		9.33	□□□□□ -0.92
MSI2-208	ENST00000579466	CCL22	O00626	93 aa		9.33	□□□□□ -0.92
MSI2-208	ENST00000579466	MAP3K7	O43318	606 aa		9.33	□□□□□ -0.92
MSI2-208	ENST00000579466	ALOX12B	O75342	701 aa		9.33	□□□□□ -0.92
MSI2-208	ENST00000579466	CBX6	O95503	412 aa		9.33	□□□□□ -0.92
MSI2-208	ENST00000579466	AGT	P01019	485 aa		9.33	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms