RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 ZNF749O43361 778 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 PRPSAP2O60256 369 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 CNOT3O75175 753 aaKnown RBP13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 UMODP07911 640 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 CD99P14209 185 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 AMPD1P23109 780 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 MIPP30301 263 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 PBX1P40424 430 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 KIR3DL1P43629 444 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 TLE4Q04727 773 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 ITKQ08881 620 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 PRKD1Q15139 912 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 INAQ16352 499 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 DPYSL2Q16555 572 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 PRAMEF13Q5VWM6 474 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 MLIPQ5VWP3 458 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 ALS2CLQ60I27 953 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 ARMC6Q6NXE6 501 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 B4GALNT4Q76KP1 1039 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 TRAPPC5Q8IUR0 188 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 CHTF18Q8WVB6 975 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 MAML1Q92585 1016 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 VPS35Q96QK1 796 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 PITPNM3Q9BZ71 974 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 EPS8L2Q9H6S3 715 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 RAD18Q9NS91 495 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 SLC24A2Q9UI40 661 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 TMPRSS11EQ9UL52 423 aa13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 NSD1Q96L73 2696 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-211ENST00000579316 ABCA4P78363 2273 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 FLNAP21333 2647 aaKnown RBP13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 CCDC78A2IDD5 438 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 OR6C74A6NCV1 312 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 DDX3YO15523 660 aaKnown RBP13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 CBSLP0DN79 551 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 FERP16591 822 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 SERPINB6P35237 376 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 CBSP35520 551 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 ADORA2A-AS1P86434 159 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 NIPAL4Q0D2K0 466 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 MAMLD1Q13495 774 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 FIGNQ5HY92 759 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 MRPL14Q6P1L8 145 aaKnown RBP13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 GFRALQ6UXV0 394 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 FAM83HQ6ZRV2 1179 aaPredicted RBP13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 POLNQ7Z5Q5 900 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 AMZ2Q86W34 360 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 MCOLN2Q8IZK6 566 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 PROKR1Q8TCW9 393 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 TEKT4Q8WW24 435 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 FATE1Q969F0 183 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 MTFMTQ96DP5 389 aaKnown RBP13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 CSPG4P5Q96PW8 444 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 TAAR6Q96RI8 345 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 XPO4Q9C0E2 1151 aaKnown RBP13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 SLC7A5P2Q9GIP4 190 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 KIR3DX1Q9H7L2 352 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 ZFYVE1Q9HBF4 777 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 SLC6A20Q9NP91 592 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 GPN3Q9UHW5 284 aaPredicted RBP13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 FBXL4Q9UKA2 621 aa13.42□□□□□ -0.26
CSNK1D-211ENST00000579316 CCDC66A2RUB6 948 aa13.41□□□□□ -0.26
CSNK1D-211ENST00000579316 MATN2O00339 956 aa13.41□□□□□ -0.26
CSNK1D-211ENST00000579316 ATMINO43313 823 aaPredicted RBP13.41□□□□□ -0.26
CSNK1D-211ENST00000579316 DRD2P14416 443 aa13.41□□□□□ -0.26
CSNK1D-211ENST00000579316 CDH3P22223 829 aa13.41□□□□□ -0.26
CSNK1D-211ENST00000579316 ARL4AP40617 200 aa13.41□□□□□ -0.26
CSNK1D-211ENST00000579316 ART1P52961 327 aa13.41□□□□□ -0.26
CSNK1D-211ENST00000579316 GALNT3Q14435 633 aa13.41□□□□□ -0.26
CSNK1D-211ENST00000579316 RHBDD2Q6NTF9 364 aa13.41□□□□□ -0.26
CSNK1D-211ENST00000579316 TMEM207Q6UWW9 146 aa13.41□□□□□ -0.26
CSNK1D-211ENST00000579316 TREX2Q9BQ50 279 aaPredicted RBP13.41□□□□□ -0.26
CSNK1D-211ENST00000579316 IMP3Q9NV31 184 aaKnown RBP13.41□□□□□ -0.26
CSNK1D-211ENST00000579316 PSMD13Q9UNM6 376 aa13.41□□□□□ -0.26
CSNK1D-211ENST00000579316 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.41□□□□□ -0.269e-8■□□□□ 9.5
CSNK1D-211ENST00000579316 JMJD1CQ15652 2540 aa13.41□□□□□ -0.26
CSNK1D-211ENST00000579316 H3BMH7 237 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 RNF8O76064 485 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 TPM1P09493 284 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 ST6GAL1P15907 406 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 HLA-DPA1P20036 260 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 MMP11P24347 488 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 DCDP81605 110 aaKnown RBP13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 TMEM115Q12893 351 aaPredicted RBP13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 MFAP5Q13361 173 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 ZFYVE27Q5T4F4 411 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 IRAK1BP1Q5VVH5 260 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 PLEKHA7Q6IQ23 1121 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 TMC3Q7Z5M5 1100 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 CEP97Q8IW35 865 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 TMEM151BQ8IW70 566 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 LMF1Q96S06 567 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 AP1M1Q9BXS5 423 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 ADGRE3Q9BY15 652 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 LHPPQ9H008 270 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 ENKD1Q9H0I2 346 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 PARVAQ9NVD7 372 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 HAUS2Q9NVX0 235 aa13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 IFT80Q9P2H3 777 aaPredicted RBP13.4□□□□□ -0.26
CSNK1D-211ENST00000579316 NDOR1Q9UHB4 597 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms