RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 ZNF28P17035 718 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 ADRA1DP25100 572 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 RPL22P35268 128 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 STAT5AP42229 794 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 SEPHS1P49903 392 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 FOXM1Q08050 763 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 SNX1Q13596 522 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 LY6DQ14210 128 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 PLCL1Q15111 1095 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 CCDC38Q502W7 563 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 C4orf22Q6V702 233 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 NLRP9Q7RTR0 991 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 PRUNE1Q86TP1 453 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 OOSP2Q86WS3 158 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 ESX1Q8N693 406 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 CCDC89Q8N998 374 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 DNAAF3Q8N9W5 541 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 ACVR1CQ8NER5 493 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 FCRL4Q96PJ5 515 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 OR6C1Q96RD1 312 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 WDR70Q9NW82 654 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 HRASLS2Q9NWW9 162 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 FAM8A1Q9UBU6 413 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 TENM4Q6N022 2769 aa12.13□□□□□ -0.47
CSNK1D-206ENST00000577578 E7EVH7 732 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 MATN2O00339 956 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 SNRNP200O75643 2136 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 FGGP02679 453 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 ZSCAN5DPP0CG00 497 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 PDHA2P29803 388 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 BOP1Q14137 746 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 CRTC2Q53ET0 693 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 DNTTIP2Q5QJE6 756 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 TSTD2Q5T7W7 516 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 CYB5D1Q6P9G0 228 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 AFTPHQ6ULP2 937 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 CERS6Q6ZMG9 384 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 PPP1R21Q6ZMI0 780 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 ZNF534Q76KX8 674 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 TAS2R42Q7RTR8 314 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 BPHLQ86WA6 291 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 D2HGDHQ8N465 521 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 EXD3Q8N9H8 876 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 MAIP1Q8WWC4 291 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 EXTL1Q92935 676 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 HDAC10Q969S8 669 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 ZNF778Q96MU6 729 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 MAP3K3Q99759 626 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 EFHD1Q9BUP0 239 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 ULBP3Q9BZM4 244 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 TWSG1Q9GZX9 223 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 TFB2MQ9H5Q4 396 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 MVB12BQ9H7P6 319 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 SMARCAL1Q9NZC9 954 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 POMT2Q9UKY4 750 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 PPP2R2CQ9Y2T4 447 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 TCAF1Q9Y4C2 921 aa12.12□□□□□ -0.47
CSNK1D-206ENST00000577578 LOC101059948A0A1B0GTJ6 334 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 CCDC78A2IDD5 438 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 OR51F1A6NGY5 319 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 ZNF891A8MT65 544 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 TERTO14746 1132 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 LIN7AO14910 233 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 GOT2P00505 430 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 FOLR1P15328 257 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 ACADLP28330 430 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 CYP4F2P78329 520 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 HSD11B2P80365 405 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 TBR1Q16650 682 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 LYPLAL1Q5VWZ2 237 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 PPP1R3BQ86XI6 285 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 KIAA1143Q96AT1 154 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 PITPNM3Q9BZ71 974 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 GPN2Q9H9Y4 310 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 HOMER3Q9NSC5 361 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 SLC2A6Q9UGQ3 507 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 BTRCQ9Y297 605 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 PRSS21Q9Y6M0 314 aa12.11□□□□□ -0.47
CSNK1D-206ENST00000577578 SLC5A10A0PJK1 596 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 OR6C74A6NCV1 312 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 AP3B1O00203 1094 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 IFRD1O00458 451 aaPredicted RBP12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 NRDCO43847 1150 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 SPAG6O75602 509 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 ZBTB11O95625 1053 aaPredicted RBP12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 FTH1P02794 183 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 MSL3P1P0C860 447 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 ITGB6P18564 788 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 PREPP48147 710 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 LMAN1P49257 510 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 KPNA2P52292 529 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 CDK16Q00536 496 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 ACY1Q03154 408 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 TUBB3Q13509 450 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 KCNAB1Q14722 419 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 C6orf15Q6UXA7 325 aaPredicted RBP12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 UNC5BQ8IZJ1 945 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 PRELID2Q8N945 189 aa12.1□□□□□ -0.47
CSNK1D-206ENST00000577578 SIDT2Q8NBJ9 832 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms