RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ZNF658BQ4V348 819 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 PLEKHS1Q5SXH7 462 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 CDCP2Q5VXM1 449 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 CAPRIN2Q6IMN6 1127 aaKnown RBP12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 UGT3A1Q6NUS8 523 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 ZDHHC24Q6UX98 284 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 GALNT7Q86SF2 657 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 PDZD3Q86UT5 571 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 CNTN4Q8IWV2 1026 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 IFT20Q8IY31 132 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 C2CD4AQ8NCU7 369 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 IFT81Q8WYA0 676 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 RMDN2Q96LZ7 410 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 TMEM74Q96NL1 305 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 BIRC8Q96P09 236 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 INSM2Q96T92 566 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 OR52A5Q9H2C5 316 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 MVB12BQ9H7P6 319 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 L2HGDHQ9H9P8 463 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 SLC40A1Q9NP59 571 aa12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 FBXO6Q9NRD1 293 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 DMGDHQ9UI17 866 aaKnown RBP12.48□□□□□ -0.41
TRAPPC1-206ENST00000573989 IGHV1OR21-1A0A087WYE8 117 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 FAM221BA6H8Z2 402 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 IQCF5A8MTL0 148 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 D6RAR5 112 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 B4GAT1O43505 415 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 AMD1P17707 334 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 AOAHP28039 575 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 PDHA2P29803 388 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 CCR7P32248 378 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 MAGEA4P43358 317 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 PREPP48147 710 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 SQSTM1Q13501 440 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 FASTKD3Q14CZ7 662 aaKnown RBP12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 TRADDQ15628 312 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 TTLL9Q3SXZ7 439 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 CTSL3PQ5NE16 218 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 C3orf62Q6ZUJ4 267 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 ZNF761Q86XN6 746 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 UNC5BQ8IZJ1 945 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 KRT222Q8N1A0 295 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 LILRA3Q8N6C8 439 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 DCBLD1Q8N8Z6 715 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 TFGQ92734 400 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 FOPNLQ96NB1 174 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 FERD3LQ96RJ6 166 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 FMO2Q99518 471 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 STRADBQ9C0K7 418 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 ZDHHC18Q9NUE0 388 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 AKAP7Q9P0M2 348 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 TXNDC16Q9P2K2 825 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 CORO1CQ9ULV4 474 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 ASF1AQ9Y294 204 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 MSRB2Q9Y3D2 182 aa12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 CFAP20Q9Y6A4 193 aaKnown RBP12.47□□□□□ -0.41
TRAPPC1-206ENST00000573989 A0A1W2PQM1 296 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 CSO75390 466 aaKnown RBP12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 VPS26AO75436 327 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 GPC4O75487 556 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 UBXN7O94888 489 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 HAUS5O94927 633 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 CD1CP29017 333 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 SKIV2L2P42285 1042 aaKnown RBP12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 MAPK9P45984 424 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 CSE1LP55060 971 aaKnown RBP12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 MPP1Q00013 466 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 TARDBPQ13148 414 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 GPR18Q14330 331 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 ISXQ2M1V0 245 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 TEDDM1Q5T9Z0 273 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 TTC23LQ6PF05 361 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 WDR74Q6RFH5 385 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 CCNI2Q6ZMN8 369 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 CAPN12Q6ZSI9 719 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 CYS1Q717R9 158 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 SLC26A11Q86WA9 606 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 PLXDC1Q8IUK5 500 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 SLC22A15Q8IZD6 547 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 ACVR1CQ8NER5 493 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 OR4D9Q8NGE8 314 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 SKA2Q8WVK7 121 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 KCNJ9Q92806 393 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 WDR83Q9BRX9 315 aaKnown RBP12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 TRIT1Q9H3H1 467 aaKnown RBP12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 KIR3DX1Q9H7L2 352 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 LATS2Q9NRM7 1088 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 MOCS1Q9NZB8 636 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 KLHL42Q9P2K6 505 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 POLG2Q9UHN1 485 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 KLK13Q9UKR3 277 aa12.46□□□□□ -0.41
TRAPPC1-206ENST00000573989 FAM149AA5PLN7 773 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 BHMG1C9JSJ3 638 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 NIPSNAP2O75323 286 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 SLCO2B1O94956 709 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 TOP3BO95985 862 aaKnown RBP12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 AHSGP02765 367 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 PROS1P07225 676 aa12.45□□□□□ -0.42
TRAPPC1-206ENST00000573989 RHOXF2BP0C7M4 288 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms