RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 MROH6A6NGR9 719 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 DLGAP3O95886 979 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 APRTP07741 180 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 EBLN1P0CF75 366 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 PRKAR1AP10644 381 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 POLR2CP19387 275 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 NDUFS1P28331 727 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 GRIA1P42261 906 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 KCNJ1P48048 391 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 PREPP48147 710 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 ABHD18Q0P651 414 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 PRKAA1Q13131 559 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 TUBB3Q13509 450 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 BRD3Q15059 726 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 CAPRIN2Q6IMN6 1127 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 C6orf15Q6UXA7 325 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 PPP1R3BQ86XI6 285 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 ESX1Q8N693 406 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 EXD3Q8N9H8 876 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 GALNT6Q8NCL4 622 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 PHC3Q8NDX5 983 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 ZFPM2Q8WW38 1151 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 LCN9Q8WX39 176 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 EFHD1Q9BUP0 239 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 PDE7BQ9NP56 450 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 SOHLH2Q9NX45 425 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 SLC2A6Q9UGQ3 507 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 RARRES3Q9UL19 164 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 MGAQ8IWI9 3026 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 GSAPA4D1B5 854 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 TLCD2A6NGC4 264 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 NKX2-8O15522 239 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 SPAG6O75602 509 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 SUN1O94901 812 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 AP2A2O94973 939 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 FGF5P12034 268 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 FOLR1P15328 257 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 PDHA2P29803 388 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 RPL22P35268 128 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 DLSTP36957 453 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 STAT5AP42229 794 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 NSG1P42857 185 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 BASP1P80723 227 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 NFATC3Q12968 1075 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 SEMA5AQ13591 1074 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 LAMB3Q13751 1172 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 CCNG2Q16589 344 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 SYTL3Q4VX76 610 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 TSTD2Q5T7W7 516 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 C16orf46Q6P387 395 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 BORAQ6PGQ7 559 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 FBXO38Q6PIJ6 1188 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 AFTPHQ6ULP2 937 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 CERS6Q6ZMG9 384 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 SLC35F6Q8N357 371 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 ACVR1CQ8NER5 493 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 PPHLN1Q8NEY8 458 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 OR6P1Q8NGX9 317 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 ELMO1Q92556 727 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 HDAC10Q969S8 669 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 MS4A14Q96JA4 679 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 SLC41A2Q96JW4 573 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 CD180Q99467 661 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 TTC1Q99614 292 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 HGH1Q9BTY7 390 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 SRMSQ9H3Y6 488 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 IL17BQ9UHF5 180 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 PRSS21Q9Y6M0 314 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 RPS6KL1Q9Y6S9 549 aa12.37□□□□□ -0.43
NPLOC4-213ENST00000573519 KATNA1O75449 491 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 GOT2P00505 430 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 FTH1P02794 183 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 OR56A5P0C7T3 313 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 CCNYL3P0C7X3 344 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 CDH3P22223 829 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 ADRA1DP25100 572 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 FOXN2P32314 431 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 KPNA2P52292 529 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 TERF1P54274 439 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 PRAMEP78395 509 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 HSD11B2P80365 405 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 ACY1Q03154 408 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 PRKG2Q13237 762 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 BOP1Q14137 746 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 MAP7Q14244 749 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 ITIH4Q14624 930 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 FASTKD1Q53R41 847 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 TMTC4Q5T4D3 741 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 LYPLAL1Q5VWZ2 237 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 NAPRTQ6XQN6 538 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 KMT5CQ86Y97 462 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 OR13J1Q8NGT2 312 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 OR4L1Q8NH43 312 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 MAIP1Q8WWC4 291 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 STARD8Q92502 1023 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 ANP32BQ92688 251 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 SLC45A3Q96JT2 553 aa12.36□□□□□ -0.43
NPLOC4-213ENST00000573519 PPM1MQ96MI6 270 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms