RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 PSME2Q9UL46 239 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 TIMM22Q9Y584 194 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 TMEM265A0A087WTH1 108 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 CDC7O00311 574 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 FCHO1O14526 889 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 AP2A2O94973 939 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 ABCB1P08183 1280 aaPredicted RBP9.94□□□□□ -0.82
SMG6-213ENST00000573166 LINC00032P0C843 101 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 GNAZP19086 355 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 HNRNPA2B1P22626 353 aaKnown RBP9.94□□□□□ -0.82
SMG6-213ENST00000573166 PAX7P23759 505 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 RPL38P63173 70 aaKnown RBP9.94□□□□□ -0.82
SMG6-213ENST00000573166 CLCQ05315 142 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 TMEM31Q5JXX7 168 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 DNAJC14Q6Y2X3 702 aaPredicted RBP9.94□□□□□ -0.82
SMG6-213ENST00000573166 PAGE2Q7Z2X7 111 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 NRSN1Q8IZ57 195 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 BANPQ8N9N5 519 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 OR2T34Q8NGX1 318 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 CENPTQ96BT3 561 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 MYEOVQ96EZ4 313 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 PLEKHG4BQ96PX9 1271 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 RPP25Q9BUL9 199 aaKnown RBP9.94□□□□□ -0.82
SMG6-213ENST00000573166 ITM2CQ9NQX7 267 aa9.94□□□□□ -0.82
SMG6-213ENST00000573166 GFRA2O00451 464 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 ZNF8P17098 575 aaPredicted RBP9.93□□□□□ -0.82
SMG6-213ENST00000573166 ACRV1P26436 265 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 TARSP26639 723 aaKnown RBP9.93□□□□□ -0.82
SMG6-213ENST00000573166 EPHA3P29320 983 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 TLX1P31314 330 aaPredicted RBP9.93□□□□□ -0.82
SMG6-213ENST00000573166 FASTKQ14296 549 aaKnown RBP9.93□□□□□ -0.82
SMG6-213ENST00000573166 Q6ZNB5 142 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 CHSY3Q70JA7 882 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 RELL1Q8IUW5 271 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 PGBD5Q8N414 524 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 PNPLA1Q8N8W4 532 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 MSANTD3Q96H12 275 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 LMLNQ96KR4 655 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 PPP3R2Q96LZ3 170 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 HBEGFQ99075 208 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 INTS6Q9UL03 887 aaKnown RBP9.93□□□□□ -0.82
SMG6-213ENST00000573166 SNX8Q9Y5X2 465 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 ZNF236Q9UL36 1845 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 LOC285095A0A1B0GVY8 99 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 RGSL1A5PLK6 1076 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 VNN2O95498 520 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 S1PR4O95977 384 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 PRSS56P0CW18 603 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 THEGLP0DJG4 465 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 DRD4P21917 467 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 MPSTP25325 297 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 CHI3L1P36222 383 aaPredicted RBP9.93□□□□□ -0.82
SMG6-213ENST00000573166 SSR2P43308 183 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 DLX2Q07687 328 aaPredicted RBP9.93□□□□□ -0.82
SMG6-213ENST00000573166 BHLHA9Q7RTU4 235 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 PARGQ86W56 976 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 MIER2Q8N344 545 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 SETD7Q8WTS6 366 aaKnown RBP9.93□□□□□ -0.82
SMG6-213ENST00000573166 COL26A1Q96A83 441 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 TMEM237Q96Q45 408 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 PNPOQ9NVS9 261 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 ARMCX1Q9P291 453 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 SCOCQ9UIL1 159 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 VEGFDO43915 354 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 ARHGEF15O94989 841 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 CLDN9O95484 217 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 KRT16P08779 473 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 JUNDP17535 347 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 S100A3P33764 101 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 LEPRP48357 1165 aaKnown RBP9.93□□□□□ -0.82
SMG6-213ENST00000573166 EPHA5P54756 1037 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 AP1S2P56377 157 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 TFF2Q03403 129 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 LCP2Q13094 533 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 HSD11B1LQ7Z5J1 315 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 GKN2Q86XP6 184 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 GPR26Q8NDV2 337 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 SIKE1Q9BRV8 207 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 MOCS1Q9NZB8 636 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 NCDNQ9UBB6 729 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 CABIN1Q9Y6J0 2220 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 MBTPS2O43462 519 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 SNUPNO95149 360 aaKnown RBP9.93□□□□□ -0.82
SMG6-213ENST00000573166 CSTF1Q05048 431 aaKnown RBP9.93□□□□□ -0.82
SMG6-213ENST00000573166 GTF2H2Q13888 395 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 GTF2H2CQ6P1K8 395 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 SLC36A4Q6YBV0 504 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 TEX26Q8N6G2 289 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 MDGA1Q8NFP4 955 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 TSACCQ96A04 125 aaPredicted RBP9.93□□□□□ -0.82
SMG6-213ENST00000573166 RAB11FIP5Q9BXF6 653 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 TRIM4Q9C037 500 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 KCNK4Q9NYG8 393 aa9.93□□□□□ -0.82
SMG6-213ENST00000573166 CNTRLQ7Z7A1 2325 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 FKBP9O95302 570 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 SIX3O95343 332 aaPredicted RBP9.92□□□□□ -0.82
SMG6-213ENST00000573166 PRAMEF14Q5SWL7 426 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 FKBP9P1Q75LS8 142 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 POU5F2Q8N7G0 328 aa9.92□□□□□ -0.82
SMG6-213ENST00000573166 GFM2Q969S9 779 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms