RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 MAPK9P45984 424 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 CARSP49589 748 aaKnown RBP6.82□□□□□ -1.32
SMG6-209ENST00000571442 TTPAP49638 278 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 GFERP55789 205 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 ARL4CP56559 192 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 GUCY2DQ02846 1103 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 ZFP36L1Q07352 338 aaKnown RBP6.82□□□□□ -1.32
SMG6-209ENST00000571442 BOP1Q14137 746 aaKnown RBP6.82□□□□□ -1.32
SMG6-209ENST00000571442 SPIDRQ14159 915 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 GBX1Q14549 363 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 KIR2DS5Q14953 304 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 DNAJC21Q5F1R6 531 aaKnown RBP6.82□□□□□ -1.32
SMG6-209ENST00000571442 SPANXN3Q5MJ09 141 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 RBM20Q5T481 1227 aaKnown RBP6.82□□□□□ -1.32
SMG6-209ENST00000571442 TEDDM1Q5T9Z0 273 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 LYPLAL1Q5VWZ2 237 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 C8orf74Q6P047 294 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 TMEM26Q6ZUK4 368 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 SLC9B2Q86UD5 537 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 CTAGE6Q86UF2 777 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 TMPRSS12Q86WS5 348 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 CNTN4Q8IWV2 1026 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 CTAGE4Q8IX94 777 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 ZBED8Q8IZ13 594 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 PDIK1LQ8N165 341 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 C2CD4AQ8NCU7 369 aaPredicted RBP6.82□□□□□ -1.32
SMG6-209ENST00000571442 RCBTB1Q8NDN9 531 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 MDM1Q8TC05 714 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 HEXDCQ8WVB3 486 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 PMEPA1Q969W9 287 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMG6-209ENST00000571442 CERS2Q96G23 380 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 C9orf72Q96LT7 481 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 PPM1MQ96MI6 270 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 NDNQ99608 321 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 SLC38A3Q99624 504 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 L2HGDHQ9H9P8 463 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 POT1Q9NUX5 634 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 IMP3Q9NV31 184 aaKnown RBP6.82□□□□□ -1.32
SMG6-209ENST00000571442 KCNK4Q9NYG8 393 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 MOCS1Q9NZB8 636 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 NCKIPSDQ9NZQ3 722 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 ZC3H7BQ9UGR2 993 aaKnown RBP6.82□□□□□ -1.32
SMG6-209ENST00000571442 CIDEBQ9UHD4 219 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 TSR3Q9UJK0 312 aaKnown RBP6.82□□□□□ -1.32
SMG6-209ENST00000571442 FBXO5Q9UKT4 447 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 UTP11Q9Y3A2 253 aaKnown RBP6.82□□□□□ -1.32
SMG6-209ENST00000571442 NEUROG3Q9Y4Z2 214 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 NFS1Q9Y697 457 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 CELSR3Q9NYQ7 3312 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 LAMA5O15230 3695 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 IGHV5-10-1A0A0J9YXX1 117 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 TRABD2BA6NFA1 517 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 LILRA5A6NI73 299 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 OR5K4A6NMS3 321 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 SMAPO00193 183 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 TAF4O00268 1085 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 KIF1CO43896 1103 aaKnown RBP6.81□□□□□ -1.32
SMG6-209ENST00000571442 ZNF500O60304 480 aaPredicted RBP6.81□□□□□ -1.32
SMG6-209ENST00000571442 VIPP01282 170 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 AHSGP02765 367 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 FTH1P02794 183 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 MPOP05164 745 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 OR56A5P0C7T3 313 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 THRAP10827 490 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 PKMP14618 531 aaKnown RBP6.81□□□□□ -1.32
SMG6-209ENST00000571442 VCLP18206 1134 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 PAMP19021 973 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 ITIH1P19827 911 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 ETV5P41161 510 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 GPR3P46089 330 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 LEPRP48357 1165 aaKnown RBP6.81□□□□□ -1.32
SMG6-209ENST00000571442 CLCN7P51798 805 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 CDKN2DP55273 166 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 HSPA14Q0VDF9 509 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 PRKG2Q13237 762 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 CUL1Q13616 776 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 THOC5Q13769 683 aaKnown RBP6.81□□□□□ -1.32
SMG6-209ENST00000571442 GRB7Q14451 532 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 C16orf72Q14CZ0 275 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 EFTUD2Q15029 972 aaKnown RBP eCLIP6.81□□□□□ -1.32
SMG6-209ENST00000571442 CCSMST1Q4G0I0 132 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 ACSBG2Q5FVE4 666 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 AARS2Q5JTZ9 985 aaKnown RBP6.81□□□□□ -1.32
SMG6-209ENST00000571442 ARMC3Q5W041 872 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 PTRHD1Q6GMV3 140 aaKnown RBP6.81□□□□□ -1.32
SMG6-209ENST00000571442 MRNIPQ6NTE8 343 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 FBXO38Q6PIJ6 1188 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 RBM44Q6ZP01 1051 aaKnown RBP6.81□□□□□ -1.32
SMG6-209ENST00000571442 PDZD3Q86UT5 571 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 PIM3Q86V86 326 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 GSPT2Q8IYD1 628 aaKnown RBP6.81□□□□□ -1.32
SMG6-209ENST00000571442 SLC22A15Q8IZD6 547 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 CACTIN-AS1Q8N1I8 211 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 GALNT15Q8N3T1 639 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 KDF1Q8NAX2 398 aaPredicted RBP6.81□□□□□ -1.32
SMG6-209ENST00000571442 SIDT2Q8NBJ9 832 aaKnown RBP6.81□□□□□ -1.32
SMG6-209ENST00000571442 BBOF1Q8ND07 529 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 OR6C4Q8NGE1 309 aa6.81□□□□□ -1.32
SMG6-209ENST00000571442 OR5AR1Q8NGP9 310 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms