RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ACVR1CQ8NER5 493 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 OR8K5Q8NH50 307 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ATG4AQ8WYN0 398 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SGSM3Q96HU1 749 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 MAP3K3Q99759 626 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 LATS2Q9NRM7 1088 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 HRASLS2Q9NWW9 162 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ZKSCAN5Q9Y2L8 839 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 CFAP20Q9Y6A4 193 aaKnown RBP16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 TENM4Q6N022 2769 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 J3QKU1 62 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CCL22O00626 93 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 ZBTB11O95625 1053 aaPredicted RBP16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 FAM87AP0C7U9 286 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TPH1P17752 444 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 FOXN2P32314 431 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CDKN1CP49918 316 aaPredicted RBP16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TUBB3Q13509 450 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 DBN1Q16643 649 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 ZRANB3Q5FWF4 1079 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 DUS1LQ6P1R4 473 aaKnown RBP16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 RASGRP3Q8IV61 690 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 LILRA3Q8N6C8 439 aaPredicted RBP16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 STARD8Q92502 1023 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TFB2MQ9H5Q4 396 aaKnown RBP16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 FAM96AQ9H5X1 160 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 MVB12BQ9H7P6 319 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 ETNK1Q9HBU6 452 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 IL17BQ9UHF5 180 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 KCND3Q9UK17 655 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 POMT2Q9UKY4 750 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 RARRES3Q9UL19 164 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 GUCA1BQ9UMX6 200 aa16.64■□□□□ 0.25
MAP1LC3B-208ENST00000570189 HEATR9A2RTY3 570 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 LIN7AO14910 233 aaPredicted RBP16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 KIAA0754O94854 1291 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 FOLR1P15328 257 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 MSNP26038 577 aaKnown RBP16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TUBB4BP68371 445 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 PLOD1Q02809 727 aaPredicted RBP16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TUBB2AQ13885 445 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 SIX1Q15475 284 aaPredicted RBP16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 LYPLAL1Q5VWZ2 237 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 ZNF449Q6P9G9 518 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 NLRP9Q7RTR0 991 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 OR13J1Q8NGT2 312 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 NAT14Q8WUY8 206 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 STAMBPL1Q96FJ0 436 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TUBB2BQ9BVA1 445 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 PITPNM3Q9BZ71 974 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TWSG1Q9GZX9 223 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 SLC25A18Q9H1K4 315 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 SYTL2Q9HCH5 934 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CASS4Q9NQ75 786 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 C1GALT1Q9NS00 363 aa16.63■□□□□ 0.25
MAP1LC3B-208ENST00000570189 UBA6A0AVT1 1052 aaPredicted RBP16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 OR6C74A6NCV1 312 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 C21orf140B9A014 251 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 IFRD1O00458 451 aaPredicted RBP16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 NKX2-8O15522 239 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 GAS8O95995 478 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 POLBP06746 335 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CCR10P46092 362 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 KPNA2P52292 529 aaKnown RBP16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 POLE2P56282 527 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 BOP1Q14137 746 aaKnown RBP16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 SEPT6Q14141 434 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 GSE1Q14687 1217 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 RPS6KA1Q15418 735 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CCNG2Q16589 344 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 ARMC6Q6NXE6 501 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 C4orf22Q6V702 233 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CERS6Q6ZMG9 384 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 ZNF517Q6ZMY9 492 aaPredicted RBP16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TAS2R42Q7RTR8 314 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 UNC5BQ8IZJ1 945 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 GALNT6Q8NCL4 622 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 OR52K1Q8NGK4 314 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 LRFN5Q96NI6 719 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 ALS2CR12Q96Q35 445 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 LHX9Q9NQ69 397 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 EIF2B3Q9NR50 452 aaKnown RBP16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 FGF21Q9NSA1 209 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 PAK5Q9P286 719 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 PADI1Q9ULC6 663 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 ZNF148Q9UQR1 794 aa16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 DRG1Q9Y295 367 aaKnown RBP16.62■□□□□ 0.25
MAP1LC3B-208ENST00000570189 SPTBP11277 2137 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 SEC16AO15027 2179 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TIAF1O95411 115 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 FTH1P02794 183 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 CCNYL3P0C7X3 344 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 EBLN1P0CF75 366 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 TCN2P20062 427 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 F8A1P23610 371 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 ADRA1DP25100 572 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 OAS2P29728 719 aaKnown RBP16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 DLSTP36957 453 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 PRKAA1Q13131 559 aa16.61■□□□□ 0.25
MAP1LC3B-208ENST00000570189 KCNAB2Q13303 367 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms