RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	KHDRBS3	O75525	346 aa	Known RBP	2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	H1F0	P07305	194 aa	Known RBP	2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	GATA2	P23769	480 aa	Predicted RBP	2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	MSH2	P43246	934 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	THOP1	P52888	689 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	HSP90AB4P	Q58FF6	505 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	JAKMIP3	Q5VZ66	844 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	CDC20B	Q86Y33	519 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	CEP97	Q8IW35	865 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	TMTC2	Q8N394	836 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	PGAM5	Q96HS1	289 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	C18orf12	Q96KH6	178 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	ZNF300	Q96RE9	604 aa	Predicted RBP	2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	SMC6	Q96SB8	1091 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	NCAPG	Q9BPX3	1015 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	MYH16	Q9H6N6	1097 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	KAT14	Q9H8E8	782 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	FAM120C	Q9NX05	1096 aa	Known RBP	2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	R3HDM2	Q9Y2K5	976 aa	Known RBP	2.9	□□□□□ -1.95
UBR1-209	ENST00000569243		A0A087X0M5	115 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243		A0A1B0GX30	115 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243		J3KRW8	73 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	KLF11	O14901	512 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	ZBTB43	O43298	467 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	PLPP2	O43688	288 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	GPC4	O75487	556 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	TRMU	O75648	421 aa	Known RBP	2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	NGF	P01138	241 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	SRPRA	P08240	638 aa	Known RBP	2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	SLC6A12	P48065	614 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	GALC	P54803	685 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	G3BP1	Q13283	466 aa	Known RBP eCLIP	2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	MEP1A	Q16819	746 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	ASTE1	Q2TB18	679 aa	Predicted RBP	2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	GLIPR1L2	Q4G1C9	344 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	DOK6	Q6PKX4	331 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	LINGO4	Q6UY18	593 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	SLC16A9	Q7RTY1	509 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	MARVELD2	Q8N4S9	558 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	HJURP	Q8NCD3	748 aa	Predicted RBP	2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	GSDMB	Q8TAX9	411 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	PRAC1	Q96KF2	57 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	KRT12	Q99456	494 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	LAT2	Q9GZY6	243 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	P2RY12	Q9H244	342 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	DENND2D	Q9H6A0	471 aa	Predicted RBP	2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	SH2D4A	Q9H788	454 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	OLFML3	Q9NRN5	406 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	SMC4	Q9NTJ3	1288 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	SETD4	Q9NVD3	440 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	PTTG2	Q9NZH5	202 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	TSPYL4	Q9UJ04	414 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	TP53TG3	Q9ULZ0	132 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	SLC7A7	Q9UM01	511 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	SESN1	Q9Y6P5	492 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	PIAS3	Q9Y6X2	628 aa		2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	2.89	□□□□□ -1.95
UBR1-209	ENST00000569243	OR6C76	A6NM76	312 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243		A8MU10	97 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243		J3QR06	171 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	ATP6V0E1	O15342	81 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	NDUFS4	O43181	175 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	GCNT3	O95395	438 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	TBX18	O95935	607 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	GH2	P01242	217 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	MAN1A1	P33908	653 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	RPS18	P62269	152 aa	Known RBP	2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	LGALS3BP	Q08380	585 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	P2RY6	Q15077	328 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	MED22	Q15528	200 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	TCTEX1D4	Q5JR98	221 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	ARHGEF16	Q5VV41	709 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	KLC3	Q6P597	504 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	GALNT13	Q8IUC8	556 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	ARID3B	Q8IVW6	561 aa	Predicted RBP	2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	ELMOD3	Q96FG2	381 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	SGK494	Q96LW2	274 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	RNF186	Q9NXI6	227 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	ZNF69	Q9UC07	566 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	AMACR	Q9UHK6	382 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	EXO1	Q9UQ84	846 aa	Known RBP	2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	B3GALT5	Q9Y2C3	310 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	CMAHP	Q9Y471	501 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	LYVE1	Q9Y5Y7	322 aa		2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	ZNF644	Q9H582	1327 aa	Predicted RBP	2.88	□□□□□ -1.95
UBR1-209	ENST00000569243	PRRC2A	P48634	2157 aa	Known RBP	2.87	□□□□□ -1.95
UBR1-209	ENST00000569243		A0A1W2PN81	502 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	FRMD3	A2A2Y4	597 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	KPNA7	A9QM74	516 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	TMEM189-UBE2V1	I3L0A0	370 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	HS6ST1	O60243	411 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	RNASEH2A	O75792	299 aa	Known RBP	2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	OR2C1	O95371	312 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	MOCS3	O95396	460 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	PIGN	O95427	931 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	CKMT2	P17540	419 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	PON1	P27169	355 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	CHRNA7	P36544	502 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	CAMP	P49913	170 aa		2.87	□□□□□ -1.95
UBR1-209	ENST00000569243	CD81	P60033	236 aa		2.87	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 115 ms