RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 PGM1P36871 562 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 KIR2DL1P43626 348 aaPredicted RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 MNAT1P51948 309 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 NME5P56597 212 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 KIF19Q2TAC6 998 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 PIP5KL1Q5T9C9 394 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 FAM91A1Q658Y4 838 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 GOLGA7Q7Z5G4 137 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 SYVN1Q86TM6 617 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 SNX32Q86XE0 403 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 TMPRSS6Q8IU80 811 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 CFAP206Q8IYR0 622 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 KIRREL3Q8IZU9 778 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 METTL6Q8TCB7 284 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 EZH1Q92800 747 aaPredicted RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 PYCR2Q96C36 320 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 VPS35Q96QK1 796 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 THTPAQ9BU02 230 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 CCDC28BQ9BUN5 200 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 MKRN2Q9H000 416 aaKnown RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 IPPKQ9H8X2 491 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 MEAF6Q9HAF1 191 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 FBXL12Q9NXK8 326 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 OPTCQ9UBM4 332 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 TMCO1Q9UM00 188 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 PRKAB1Q9Y478 270 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 COPG1Q9Y678 874 aaKnown RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 QSOX1O00391 747 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 TAPBPO15533 448 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 PEX11AO75192 247 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 AP2A2O94973 939 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 KLF8O95600 359 aaPredicted RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 PAK4O96013 591 aaPredicted RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 FGF4P08620 206 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 COX4I1P13073 169 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 HOXB2P14652 356 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 CD72P21854 359 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 PIK3R1P27986 724 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 NTSR1P30989 418 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 PIK3CGP48736 1102 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 CCNG1P51959 295 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 GTF2H3Q13889 308 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 TTC31Q49AM3 519 aaPredicted RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 TCHHL1Q5QJ38 904 aaPredicted RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 PLEKHS1Q5SXH7 462 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 SULT1C3Q6IMI6 304 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 CYP2U1Q7Z449 544 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 MILR1Q7Z6M3 343 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 SUGP1Q8IWZ8 645 aaKnown RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 PLA2G15Q8NCC3 412 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 PDPRQ8NCN5 879 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 OR14C36Q8NHC7 312 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 ZNF483Q8TF39 744 aaPredicted RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 FOXJ1Q92949 421 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 RAB7BQ96AH8 199 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 MAELQ96JY0 434 aaKnown RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 HDAC8Q9BY41 377 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 ZCCHC2Q9C0B9 1178 aaKnown RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 RSPH9Q9H1X1 276 aaPredicted RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 AKTIPQ9H8T0 292 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 KCNK12Q9HB15 430 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 PARVBQ9HBI1 364 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 CCDC167Q9P0B6 97 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 EPS15L1Q9UBC2 864 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 ZNF225Q9UK10 706 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 PDE10AQ9Y233 779 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 TMEM98Q9Y2Y6 226 aa6.93□□□□□ -1.3
SMG1-215ENST00000568239 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.93□□□□□ -1.3
SMG1-215ENST00000568239 MUC22E2RYF6 1773 aaPredicted RBP6.92□□□□□ -1.3
SMG1-215ENST00000568239 FFAR3O14843 346 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 GPR42O15529 346 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 SGTAO43765 313 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 STK16O75716 305 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 SOD1P00441 154 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 DNTTP04053 509 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 CAPN1P07384 714 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 VCANP13611 3396 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 HGFP14210 728 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 CYP2A7P20853 494 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 C5AR1P21730 350 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 TNFRSF4P43489 277 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 ERFP50548 548 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 NUDT2P50583 147 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 GRSF1Q12849 480 aaKnown RBP eCLIP6.92□□□□□ -1.3
SMG1-215ENST00000568239 CAMK2GQ13555 558 aaPredicted RBP6.92□□□□□ -1.3
SMG1-215ENST00000568239 CYLC2Q14093 348 aaPredicted RBP6.92□□□□□ -1.3
SMG1-215ENST00000568239 NAA25Q14CX7 972 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 RPS6KA2Q15349 733 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 PCBP2Q15366 365 aaKnown RBP eCLIP6.92□□□□□ -1.35e-7■■□□□ 14
SMG1-215ENST00000568239 ZRSR2Q15696 482 aaKnown RBP6.92□□□□□ -1.3
SMG1-215ENST00000568239 UGT3A2Q3SY77 523 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 TMEM52BQ4KMG9 183 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 TMEM196Q5HYL7 178 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 AGBL4Q5VU57 503 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 KANK2Q63ZY3 851 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 ZNF776Q68DI1 518 aaPredicted RBP6.92□□□□□ -1.3
SMG1-215ENST00000568239 TRMT11Q7Z4G4 463 aaKnown RBP6.92□□□□□ -1.3
SMG1-215ENST00000568239 FAM124AQ86V42 546 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 PARP9Q8IXQ6 854 aa6.92□□□□□ -1.3
SMG1-215ENST00000568239 OR4F6Q8NGB9 312 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms