RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CDR2LQ86X02 465 aaPredicted RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 LRRC49Q8IUZ0 686 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 VRK3Q8IV63 474 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 CCDC117Q8IWD4 279 aaPredicted RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 ADGRF2Q8IZF7 708 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 NDUFAF2Q8N183 169 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 SCML4Q8N228 414 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 C12orf29Q8N999 325 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 TDRD5Q8NAT2 981 aaKnown RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 B3GALNT2Q8NCR0 500 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 STKLD1Q8NE28 680 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 RDH11Q8TC12 318 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 RNF139Q8WU17 664 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 CMTM5Q96DZ9 223 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 PTCD3Q96EY7 689 aaKnown RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 SERAC1Q96JX3 654 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 TSNARE1Q96NA8 513 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 NUDCD1Q96RS6 583 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 NPY6RQ99463 290 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 SMAD5Q99717 465 aaKnown RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 CCDC28BQ9BUN5 200 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 TMEM120AQ9BXJ8 343 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 VCX3BQ9H321 246 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 CYP4F11Q9HBI6 524 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 CHST12Q9NRB3 414 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 BFARQ9NZS9 450 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 HACD3Q9P035 362 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 FNIP2Q9P278 1114 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 HEY2Q9UBP5 337 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 ZNF212Q9UDV6 495 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 BCAP29Q9UHQ4 241 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 TAGLN3Q9UI15 199 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 HAO1Q9UJM8 370 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 ANGPTL2Q9UKU9 493 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 FZD10Q9ULW2 581 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 HBS1LQ9Y450 684 aaKnown RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 CDY1Q9Y6F8 540 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 ATG2AQ2TAZ0 1938 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 DOCK5Q9H7D0 1870 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 FAM237BA0A1B0GVD1 139 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 WDR91A4D1P6 747 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 CCDC154A6NI56 674 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 UNC119BA6NIH7 251 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 TMEM114B3SHH9 223 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 GOLGA8RI6L899 631 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 HAS3O00219 553 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 RNF103O00237 685 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 EEF2KO00418 725 aaKnown RBP5.28□□□□□ -1.56
CAPN3-217ENST00000567817 FCHO1O14526 889 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 DIAPH2O60879 1101 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 PEX11AO75192 247 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 FKBP6O75344 327 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 BANF1O75531 89 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 GRAP2O75791 330 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 SPDEFO95238 335 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 CBX6O95503 412 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 METTL18O95568 372 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 AP2A1O95782 977 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 ZNF286BP0CG31 522 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 TPBGLP0DKB5 382 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 SMIM10L2AP0DMW4 78 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 SMIM10L2BP0DMW5 78 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 GNAZP19086 355 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 SLC6A2P23975 617 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 ACAT1P24752 427 aaKnown RBP5.28□□□□□ -1.56
CAPN3-217ENST00000567817 SERPINB3P29508 390 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 PRDX6P30041 224 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 SPRP35270 261 aaPredicted RBP5.28□□□□□ -1.56
CAPN3-217ENST00000567817 SERPINB5P36952 375 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 THPOP40225 353 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 VHLP40337 213 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 MTHFRP42898 656 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 MAGEA12P43365 314 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 AVPR1BP47901 424 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 NPY2RP49146 381 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 RAB27AP51159 221 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 CLCN2P51788 898 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 KPNA2P52292 529 aaKnown RBP5.28□□□□□ -1.56
CAPN3-217ENST00000567817 CSE1LP55060 971 aaKnown RBP5.28□□□□□ -1.56
CAPN3-217ENST00000567817 SHC2P98077 582 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 XIAPP98170 497 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 PDE1BQ01064 536 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 GAD2Q05329 585 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 DEUP1Q05D60 604 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 SLC34A1Q06495 639 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 PPIDQ08752 370 aaKnown RBP5.28□□□□□ -1.56
CAPN3-217ENST00000567817 NIPAL4Q0D2K0 466 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 BST1Q10588 318 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 CAMK1Q14012 370 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 TAF11Q15544 211 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 MAPRE1Q15691 268 aaKnown RBP5.28□□□□□ -1.56
CAPN3-217ENST00000567817 CHI3L2Q15782 390 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 GSTA3Q16772 222 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 DUSP6Q16828 381 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 TCTN1Q2MV58 587 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 C3orf36Q3SXR2 165 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 TEX44Q53QW1 395 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 FSCBQ5H9T9 825 aa5.28□□□□□ -1.56
CAPN3-217ENST00000567817 CRB2Q5IJ48 1285 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms