RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 RASGEF1AQ8N9B8 481 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLK3-218ENST00000566926 OR10G6Q8NH81 332 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 FBF1Q8TES7 1133 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 FGF11Q92914 225 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.18□□□□□ -0.37e-11■■■■■ 32
CLK3-218ENST00000566926 DNAJC1Q96KC8 554 aaKnown RBP13.18□□□□□ -0.3
CLK3-218ENST00000566926 TTC1Q99614 292 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 COPS8Q99627 209 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 PRDM8Q9NQV8 689 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 THSD1Q9NS62 852 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 FAM53CQ9NYF3 392 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 MOCS1Q9NZB8 636 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 CPNE7Q9UBL6 633 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 SLC23A2Q9UGH3 650 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 ATXN7L1Q9ULK2 861 aaPredicted RBP13.18□□□□□ -0.3
CLK3-218ENST00000566926 SATB2Q9UPW6 733 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 DNAJC16Q9Y2G8 782 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 FAM169AQ9Y6X4 670 aa13.18□□□□□ -0.3
CLK3-218ENST00000566926 KMT2BQ9UMN6 2715 aaPredicted RBP13.17□□□□□ -0.3
CLK3-218ENST00000566926 IGHV1OR21-1A0A087WYE8 117 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 MROH6A6NGR9 719 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 TAF4O00268 1085 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 RGS16O15492 202 aaPredicted RBP13.17□□□□□ -0.3
CLK3-218ENST00000566926 RRP8O43159 456 aaKnown RBP13.17□□□□□ -0.3
CLK3-218ENST00000566926 DUX1O43812 170 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 EML2O95834 649 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 VIPP01282 170 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 SHBGP04278 402 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 EPHA4P54764 986 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 CACNG1Q06432 222 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 ZFP36L1Q07352 338 aaKnown RBP13.17□□□□□ -0.3
CLK3-218ENST00000566926 TRA2AQ13595 282 aaKnown RBP eCLIP13.17□□□□□ -0.3
CLK3-218ENST00000566926 TBC1D25Q3MII6 688 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 ANKRD20A4Q4UJ75 823 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 ZRANB3Q5FWF4 1079 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 LGSNQ5TDP6 509 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 LRRC69Q6ZNQ3 347 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 RAB11FIP2Q7L804 512 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 C11orf96Q7Z7L8 435 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 RBM12BQ8IXT5 1001 aaKnown RBP13.17□□□□□ -0.3
CLK3-218ENST00000566926 LMNTD2Q8IXW0 634 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 KRT222Q8N1A0 295 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 MPP5Q8N3R9 675 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 FBXO39Q8N4B4 442 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 BEND7Q8N7W2 519 aaPredicted RBP13.17□□□□□ -0.3
CLK3-218ENST00000566926 CDKN2AIPNLQ96HQ2 116 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 CMKLR1Q99788 373 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 ZMYND15Q9H091 742 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 UCK1Q9HA47 277 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 TMBIM4Q9HC24 238 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 POT1Q9NUX5 634 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 ZDHHC3Q9NYG2 299 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 SENP1Q9P0U3 644 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 PSMC3IPQ9P2W1 217 aaPredicted RBP13.17□□□□□ -0.3
CLK3-218ENST00000566926 LGALS13Q9UHV8 139 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 ZNF180Q9UJW8 692 aa13.17□□□□□ -0.3
CLK3-218ENST00000566926 DMXL2Q8TDJ6 3036 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 ADAMTS20P59510 1910 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 MGAT4DA6NG13 374 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 LILRA5A6NI73 299 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 PRR19A6NJB7 356 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 FAM159BA6NKW6 160 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 OR2AG2A6NM03 316 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 F8W8V4 182 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 QSOX1O00391 747 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 PLD2O14939 933 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 GPR39O43194 453 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 INHBAP08476 426 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 JMJD7P0C870 316 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 ATP1B2P14415 290 aaPredicted RBP13.16□□□□□ -0.3
CLK3-218ENST00000566926 PSMA3P25788 255 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 CNTFP26441 200 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 CD1CP29017 333 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 PPARGP37231 505 aaPredicted RBP13.16□□□□□ -0.3
CLK3-218ENST00000566926 MSH2P43246 934 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 PDX1P52945 283 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 CTSCP53634 463 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 MGAT5Q09328 741 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 LONRF1Q17RB8 773 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 BCL7AQ4VC05 210 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 PHF19Q5T6S3 580 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 LYPLAL1Q5VWZ2 237 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 KIAA0930Q6ICG6 404 aaPredicted RBP13.16□□□□□ -0.3
CLK3-218ENST00000566926 USP53Q70EK8 1073 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 TAS2R42Q7RTR8 314 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 B3GNT8Q7Z7M8 397 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 SLC26A11Q86WA9 606 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 OR4D9Q8NGE8 314 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 OR2W6PQ8NHA6 318 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 SNIP1Q8TAD8 396 aaKnown RBP13.16□□□□□ -0.3
CLK3-218ENST00000566926 CALML6Q8TD86 181 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 ZNF669Q96BR6 464 aaPredicted RBP13.16□□□□□ -0.3
CLK3-218ENST00000566926 CXorf40BQ96DE9 158 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 CERS2Q96G23 380 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 ATP6V1G3Q96LB4 118 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 LINC00615Q96LM1 132 aaPredicted RBP13.16□□□□□ -0.3
CLK3-218ENST00000566926 SLC46A1Q96NT5 459 aa13.16□□□□□ -0.3
CLK3-218ENST00000566926 PIH1D1Q9NWS0 290 aaKnown RBP13.16□□□□□ -0.3
CLK3-218ENST00000566926 OGFRQ9NZT2 677 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms