RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 TMEM237Q96Q45 408 aa29.95■■■□□ 2.38
CTCF-203ENST00000566078 ACSS2Q9NR19 701 aa29.95■■■□□ 2.38
CTCF-203ENST00000566078 NUDT4Q9NZJ9 180 aa29.95■■■□□ 2.38
CTCF-203ENST00000566078 CD274Q9NZQ7 290 aa29.95■■■□□ 2.38
CTCF-203ENST00000566078 DNAJC16Q9Y2G8 782 aa29.95■■■□□ 2.38
CTCF-203ENST00000566078 OARD1Q9Y530 152 aa29.95■■■□□ 2.38
CTCF-203ENST00000566078 TOR1BO14657 336 aa29.94■■■□□ 2.38
CTCF-203ENST00000566078 C8GP07360 202 aa29.94■■■□□ 2.38
CTCF-203ENST00000566078 PDHA2P29803 388 aa29.94■■■□□ 2.38
CTCF-203ENST00000566078 RABIFP47224 123 aa29.94■■■□□ 2.38
CTCF-203ENST00000566078 THOP1P52888 689 aa29.94■■■□□ 2.38
CTCF-203ENST00000566078 TGFBIQ15582 683 aa29.94■■■□□ 2.38
CTCF-203ENST00000566078 PFKFB4Q16877 469 aa29.94■■■□□ 2.38
CTCF-203ENST00000566078 ENPP7Q6UWV6 458 aa29.94■■■□□ 2.38
CTCF-203ENST00000566078 SLC36A4Q6YBV0 504 aa29.94■■■□□ 2.38
CTCF-203ENST00000566078 FAM83HQ6ZRV2 1179 aaPredicted RBP29.94■■■□□ 2.38
CTCF-203ENST00000566078 Q6ZSR6 202 aa29.94■■■□□ 2.38
CTCF-203ENST00000566078 CADM4Q8NFZ8 388 aa29.94■■■□□ 2.38
CTCF-203ENST00000566078 ORAI3Q9BRQ5 295 aa29.94■■■□□ 2.38
CTCF-203ENST00000566078 NSRP1Q9H0G5 558 aaKnown RBP29.94■■■□□ 2.38
CTCF-203ENST00000566078 PRMT8Q9NR22 394 aaPredicted RBP29.94■■■□□ 2.38
CTCF-203ENST00000566078 PRSS38A1L453 326 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 METTL12A8MUP2 240 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 H3BM21 787 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 EDF1O60869 148 aaKnown RBP29.93■■■□□ 2.38
CTCF-203ENST00000566078 SNNO75324 88 aaPredicted RBP29.93■■■□□ 2.38
CTCF-203ENST00000566078 NAGLUP54802 743 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 PHKG1Q16816 387 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 UBE2R2Q712K3 238 aaPredicted RBP29.93■■■□□ 2.38
CTCF-203ENST00000566078 CHST15Q7LFX5 561 aaPredicted RBP29.93■■■□□ 2.38
CTCF-203ENST00000566078 CPLX4Q7Z7G2 160 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 OR13H1Q8NG92 308 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 DLG3Q92796 817 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 MOCOSQ96EN8 888 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 PITPNM3Q9BZ71 974 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 ZNF395Q9H8N7 513 aaPredicted RBP29.93■■■□□ 2.38
CTCF-203ENST00000566078 TMCO1Q9UM00 188 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 SNX2O60749 519 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 S100BP04271 92 aaPredicted RBP29.93■■■□□ 2.38
CTCF-203ENST00000566078 ACP5P13686 325 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 GNPDA1P46926 289 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 SLC1A6P48664 564 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 SP140Q13342 867 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 PYCR3Q53H96 274 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 RAB44Q7Z6P3 723 aaPredicted RBP29.93■■■□□ 2.38
CTCF-203ENST00000566078 CCNYL1Q8N7R7 359 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 ASB11Q8WXH4 323 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 SCARF2Q96GP6 870 aaPredicted RBP29.93■■■□□ 2.38
CTCF-203ENST00000566078 CCT8L2Q96SF2 557 aa29.93■■■□□ 2.38
CTCF-203ENST00000566078 MEI4A8MW99 385 aa29.92■■■□□ 2.38
CTCF-203ENST00000566078 TMEM114B3SHH9 223 aa29.92■■■□□ 2.38
CTCF-203ENST00000566078 MAP3K13O43283 966 aa29.92■■■□□ 2.38
CTCF-203ENST00000566078 LYPLA1O75608 230 aaPredicted RBP29.92■■■□□ 2.38
CTCF-203ENST00000566078 BCKDHBP21953 392 aa29.92■■■□□ 2.38
CTCF-203ENST00000566078 PLOD1Q02809 727 aaPredicted RBP29.92■■■□□ 2.38
CTCF-203ENST00000566078 ABRQ12979 859 aa29.92■■■□□ 2.38
CTCF-203ENST00000566078 OR1E3Q8WZA6 343 aa29.92■■■□□ 2.38
CTCF-203ENST00000566078 PDXPQ96GD0 296 aa29.92■■■□□ 2.38
CTCF-203ENST00000566078 SLC6A18Q96N87 628 aa29.92■■■□□ 2.38
CTCF-203ENST00000566078 TIMM29Q9BSF4 260 aa29.92■■■□□ 2.38
CTCF-203ENST00000566078 CARS2Q9HA77 564 aaKnown RBP29.92■■■□□ 2.38
CTCF-203ENST00000566078 THAP1Q9NVV9 213 aa29.92■■■□□ 2.38
CTCF-203ENST00000566078 GPSM3Q9Y4H4 160 aa29.92■■■□□ 2.38
CTCF-203ENST00000566078 FFAR2O15552 330 aa29.91■■■□□ 2.38
CTCF-203ENST00000566078 ITM2AO43736 263 aa29.91■■■□□ 2.38
CTCF-203ENST00000566078 KLK8O60259 260 aa29.91■■■□□ 2.38
CTCF-203ENST00000566078 MATN4O95460 622 aa29.91■■■□□ 2.38
CTCF-203ENST00000566078 FAM107AO95990 144 aa29.91■■■□□ 2.38
CTCF-203ENST00000566078 HOXA6P31267 233 aa29.91■■■□□ 2.38
CTCF-203ENST00000566078 ABCE1P61221 599 aaKnown RBP29.91■■■□□ 2.38
CTCF-203ENST00000566078 OCRLQ01968 901 aa29.91■■■□□ 2.38
CTCF-203ENST00000566078 CFAP61Q8NHU2 1237 aa29.91■■■□□ 2.38
CTCF-203ENST00000566078 BCAS4Q8TDM0 211 aa29.91■■■□□ 2.38
CTCF-203ENST00000566078 L3HYPDHQ96EM0 354 aa29.91■■■□□ 2.38
CTCF-203ENST00000566078 C20orf27Q9GZN8 174 aa29.91■■■□□ 2.38
CTCF-203ENST00000566078 AASDHPPTQ9NRN7 309 aa29.91■■■□□ 2.38
CTCF-203ENST00000566078 SLCO1B1Q9Y6L6 691 aa29.91■■■□□ 2.38
CTCF-203ENST00000566078 KLHL33A6NCF5 533 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 SLC16A5O15375 505 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 LAMTOR5O43504 91 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 GUCA1CO95843 209 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 VCLP18206 1134 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 IMPDH1P20839 514 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 CD27P26842 260 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 FNTBP49356 437 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 CFAP157Q5JU67 520 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 SLC12A9Q9BXP2 914 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 DPEP2Q9H4A9 486 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 RDH14Q9HBH5 336 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 KLC4Q9NSK0 619 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 KLQ9UEF7 1012 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 MUC3AQ02505 3323 aa29.9■■■□□ 2.38
CTCF-203ENST00000566078 ENO2P09104 434 aaPredicted RBP29.89■■■□□ 2.38
CTCF-203ENST00000566078 CYP2A7P20853 494 aa29.89■■■□□ 2.38
CTCF-203ENST00000566078 ARRB2P32121 409 aa29.89■■■□□ 2.38
CTCF-203ENST00000566078 ALDH18A1P54886 795 aaKnown RBP29.89■■■□□ 2.38
CTCF-203ENST00000566078 HERVK_113P63132 956 aa29.89■■■□□ 2.38
CTCF-203ENST00000566078 RPA4Q13156 261 aa29.89■■■□□ 2.38
CTCF-203ENST00000566078 RCN2Q14257 317 aa29.89■■■□□ 2.38
CTCF-203ENST00000566078 ZNF678Q5SXM1 525 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms