RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 CDC37Q16543 378 aaPredicted RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 ZNF813Q6ZN06 617 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 PXKQ7Z7A4 578 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 ZC3H3Q8IXZ2 948 aaKnown RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 SYCE1Q8N0S2 351 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 ACTRT1Q8TDG2 376 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 CENPIQ92674 756 aaPredicted RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 TAF4BQ92750 862 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 CENPTQ96BT3 561 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 NPLQ9BXD5 320 aaPredicted RBP4.23□□□□□ -1.73
LINC00561-201ENST00000565815 ISCUQ9H1K1 167 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 JMJD4Q9H9V9 463 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 LRWD1Q9UFC0 647 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 FBXL5Q9UKA1 691 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 TNFSF13BQ9Y275 285 aa4.23□□□□□ -1.73
LINC00561-201ENST00000565815 A0A0U1RQJ8 604 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 C5orf60A6NFR6 353 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 TSPY2A6NKD2 308 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 FOXO6A8MYZ6 492 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 PES1O00541 588 aaKnown RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 AHCYL1O43865 530 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 MLYCDO95822 493 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 CHRM4P08173 479 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 LINC00271P0C7V0 271 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 NR1D1P20393 614 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 CDC25AP30304 524 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 RDXP35241 583 aaKnown RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 MDH1P40925 334 aaKnown RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 NAP1L1P55209 391 aaKnown RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 FKBP3Q00688 224 aaKnown RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 C2orf54Q08AI8 447 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 CELF3Q5SZQ8 465 aaKnown RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 SFMBT2Q5VUG0 894 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 TMEM81Q6P7N7 255 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 CACNA2D4Q7Z3S7 1137 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 GPAT4Q86UL3 456 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 CADM4Q8NFZ8 388 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 HDAC7Q8WUI4 952 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 FAR1Q8WVX9 515 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 RFFLQ8WZ73 363 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 CAPZA3Q96KX2 299 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 NAP1L3Q99457 506 aaPredicted RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 LRRC1Q9BTT6 524 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 SPRTNQ9H040 489 aaPredicted RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 NT5C3AQ9H0P0 336 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 POLR1BQ9H9Y6 1135 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 AGPAT5Q9NUQ2 364 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 IL1RAPL1Q9NZN1 696 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 AIPL1Q9NZN9 384 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 FBXO9Q9UK97 447 aaPredicted RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 TTC7AQ9ULT0 858 aaPredicted RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 CORO1CQ9ULV4 474 aaPredicted RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 RAP2CQ9Y3L5 183 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 TRIP12Q14669 1992 aaPredicted RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 MACROD2A1Z1Q3 448 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 HSPB2A8KAH6 182 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 H0YHG0 523 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 LINC01565O15544 149 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 TULP3O75386 442 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 PRDM1O75626 825 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 CLDN7O95471 211 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 PRKCGP05129 697 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 PROS1P07225 676 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 GSTA1P08263 222 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 MYZAPP0CAP1 466 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 HNRNPH1P31943 449 aaKnown RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 CPA2P48052 419 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 LIMK1P53667 647 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 GAD2Q05329 585 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 ACTN3Q08043 901 aaPredicted RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 KLF9Q13886 244 aaPredicted RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 HSPB2Q16082 182 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 EDRF1Q3B7T1 1238 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 LACTB2Q53H82 288 aaPredicted RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 HYIQ5T013 277 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 ZNF626Q68DY1 528 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 CPLX4Q7Z7G2 160 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 VPS36Q86VN1 386 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 CCDC13Q8IYE1 715 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 KIAA2013Q8IYS2 634 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 VN1R2Q8NFZ6 395 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 CCDC26Q8TAB7 109 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 KLHL29Q96CT2 875 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 RUNDC3BQ96NL0 473 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 ZIM3Q96PE6 472 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 STMN4Q9H169 189 aaPredicted RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 FAM114A2Q9NRY5 505 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 THSD1Q9NS62 852 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 SEPT11Q9NVA2 429 aaKnown RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 TMEM45AQ9NWC5 275 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 TRIM10Q9UDY6 481 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 ANGPTL2Q9UKU9 493 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 INTS6Q9UL03 887 aaKnown RBP4.22□□□□□ -1.73
LINC00561-201ENST00000565815 RAB23Q9ULC3 237 aa4.22□□□□□ -1.73
LINC00561-201ENST00000565815 CACNA1IQ9P0X4 2223 aa4.21□□□□□ -1.73
LINC00561-201ENST00000565815 A0A1W2PQF6 199 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 TRIM49BA6NDI0 452 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 VGLL3A8MV65 326 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 CCDC172P0C7W6 258 aa4.21□□□□□ -1.74
LINC00561-201ENST00000565815 SP9P0CG40 484 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms