RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 EXO1Q9UQ84 846 aaKnown RBP4.31□□□□□ -1.72
UBR1-205ENST00000564540 IGLV9-49A0A0B4J1Y8 123 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 CDRT15L2A8MXV6 281 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 PTGES3LE9PB15 166 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 DNM1LO00429 736 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 MITFO75030 526 aaPredicted RBP4.3□□□□□ -1.72
UBR1-205ENST00000564540 TRMUO75648 421 aaKnown RBP4.3□□□□□ -1.72
UBR1-205ENST00000564540 WNT5AP41221 380 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 ARF3P61204 181 aaPredicted RBP4.3□□□□□ -1.72
UBR1-205ENST00000564540 IRX1P78414 480 aaPredicted RBP4.3□□□□□ -1.72
UBR1-205ENST00000564540 ARF1P84077 181 aaKnown RBP4.3□□□□□ -1.72
UBR1-205ENST00000564540 PNRC1Q12796 327 aaPredicted RBP4.3□□□□□ -1.72
UBR1-205ENST00000564540 MELKQ14680 651 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 ARHGEF16Q5VV41 709 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 BHLHB9Q6PI77 547 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 AACSQ86V21 672 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 MAPK1IP1LQ8NDC0 245 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 ZFAND2BQ8WV99 257 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 ERLEC1Q96DZ1 483 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 MYADMQ96S97 322 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 PPIL3Q9H2H8 161 aaKnown RBP4.3□□□□□ -1.72
UBR1-205ENST00000564540 HRH4Q9H3N8 390 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 TMEM181Q9P2C4 612 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 RHCGQ9UBD6 479 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 ZNF69Q9UC07 566 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 RASAL2Q9UJF2 1139 aa4.3□□□□□ -1.72
UBR1-205ENST00000564540 ELOVL7A1L3X0 281 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 ERI2A8K979 691 aaKnown RBP4.29□□□□□ -1.72
UBR1-205ENST00000564540 AP3D1O14617 1153 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 EML2O95834 649 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 PAX3P23760 479 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 NKX2-1P43699 371 aaPredicted RBP4.29□□□□□ -1.72
UBR1-205ENST00000564540 MFAP4P55083 255 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 KCNJ10P78508 379 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 LGALS3BPQ08380 585 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 TUBB2AQ13885 445 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 KRT33BQ14525 404 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 DCAF10Q5QP82 559 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 SLC16A9Q7RTY1 509 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 MCEMP1Q8IX19 187 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 C16orf70Q9BSU1 422 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 TUBB2BQ9BVA1 445 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 WDR13Q9H1Z4 485 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 SMARCAD1Q9H4L7 1026 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 ACKR4Q9NPB9 350 aa4.29□□□□□ -1.72
UBR1-205ENST00000564540 SOS1Q07889 1333 aaPredicted RBP4.28□□□□□ -1.72
UBR1-205ENST00000564540 CACNA1FO60840 1977 aa4.28□□□□□ -1.72
UBR1-205ENST00000564540 A0A1W2PRB8 838 aa4.28□□□□□ -1.72
UBR1-205ENST00000564540 MED19A0JLT2 244 aaPredicted RBP4.28□□□□□ -1.72
UBR1-205ENST00000564540 MEIOCA2RUB1 952 aa4.28□□□□□ -1.72
UBR1-205ENST00000564540 SH2B2O14492 632 aaPredicted RBP4.28□□□□□ -1.72
UBR1-205ENST00000564540 VILLO15195 856 aa4.28□□□□□ -1.72
UBR1-205ENST00000564540 BAIAP3O94812 1187 aa4.28□□□□□ -1.72
UBR1-205ENST00000564540 HMBSP08397 361 aa4.28□□□□□ -1.72
UBR1-205ENST00000564540 LUMP51884 338 aaPredicted RBP4.28□□□□□ -1.72
UBR1-205ENST00000564540 TMF1P82094 1093 aa4.28□□□□□ -1.72
UBR1-205ENST00000564540 SP3Q02447 781 aa4.28□□□□□ -1.72
UBR1-205ENST00000564540 P2RY6Q15077 328 aa4.28□□□□□ -1.72
UBR1-205ENST00000564540 ADAMTSL4-AS1Q5T5F5 129 aa4.28□□□□□ -1.72
UBR1-205ENST00000564540 CYP4A22Q5TCH4 519 aa4.28□□□□□ -1.72
UBR1-205ENST00000564540 C1orf122Q6ZSJ8 110 aa4.28□□□□□ -1.72
UBR1-205ENST00000564540 INTS8Q75QN2 995 aaKnown RBP4.28□□□□□ -1.72
UBR1-205ENST00000564540 CPSF7Q8N684 471 aaKnown RBP4.28□□□□□ -1.72
UBR1-205ENST00000564540 OR1J1Q8NGS3 322 aa4.28□□□□□ -1.72
UBR1-205ENST00000564540 HSD17B8Q92506 261 aa4.28□□□□□ -1.72
UBR1-205ENST00000564540 LRRC59Q96AG4 307 aaKnown RBP4.28□□□□□ -1.72
UBR1-205ENST00000564540 CHMP1AQ9HD42 196 aaPredicted RBP4.28□□□□□ -1.72
UBR1-205ENST00000564540 ASTN2O75129 1339 aaPredicted RBP4.27□□□□□ -1.73
UBR1-205ENST00000564540 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 IGHV4-61A0A0C4DH41 118 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 LNP1A1A4G5 178 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 LRRC72A6NJI9 287 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 IGHV4-59P01825 116 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 TPOP07202 933 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 CAPN3P20807 821 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 GRTP1Q5TC63 336 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 PWWP2BQ6NUJ5 590 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 ZNF554Q86TJ5 538 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 FAM114A1Q8IWE2 563 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 TEX19Q8NA77 164 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 KBTBD8Q8NFY9 601 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 GRHL3Q8TE85 626 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 MTERF3Q96E29 417 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 SAT2Q96F10 170 aaPredicted RBP4.27□□□□□ -1.73
UBR1-205ENST00000564540 GIMAP5Q96F15 307 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 GMPPAQ96IJ6 420 aaPredicted RBP4.27□□□□□ -1.73
UBR1-205ENST00000564540 OPRPNQ99935 248 aaPredicted RBP4.27□□□□□ -1.73
UBR1-205ENST00000564540 CHCHD6Q9BRQ6 235 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 RTN4RQ9BZR6 473 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 ERVMER34-1Q9H9K5 563 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 A4GALTQ9NPC4 353 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 ATAD3AQ9NVI7 634 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 OSER1Q9NX31 292 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 PLAGL1Q9UM63 463 aa4.27□□□□□ -1.73
UBR1-205ENST00000564540 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.27□□□□□ -1.73
UBR1-205ENST00000564540 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 E9PI62 339 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 TCERG1O14776 1098 aaKnown RBP4.26□□□□□ -1.73
UBR1-205ENST00000564540 SSX4O60224 188 aa4.26□□□□□ -1.73
UBR1-205ENST00000564540 DOK2O60496 412 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms