RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 CD1DP15813 335 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 TFEBP19484 476 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 CHRM3P20309 590 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 MAT2AP31153 395 aaKnown RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 CBSP35520 551 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 GLRBP48167 497 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 SLC1A6P48664 564 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 AFF3P51826 1226 aaKnown RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 ABCE1P61221 599 aaKnown RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 NFKB2Q00653 900 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 ZBTB16Q05516 673 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 CNTN1Q12860 1018 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 SFSWAPQ12872 951 aaKnown RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 SETDB1Q15047 1291 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 CHRNA6Q15825 494 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 ZNF423Q2M1K9 1284 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 CFAP157Q5JU67 520 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 LDLRAP1Q5SW96 308 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 HENMT1Q5T8I9 393 aaKnown RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 AGBL4Q5VU57 503 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 LIPIQ6XZB0 460 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 MACC1Q6ZN28 852 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 USP30Q70CQ3 517 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 ERN2Q76MJ5 926 aaKnown RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 KANSL1Q7Z3B3 1105 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 C10orf107Q8IVU9 208 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 HOMEZQ8IX15 550 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 AFAP1L2Q8N4X5 818 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 PIWIL2Q8TC59 973 aaKnown RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 GANCQ8TET4 914 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 SETD7Q8WTS6 366 aaKnown RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 ADAMTS14Q8WXS8 1223 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 ZCCHC14Q8WYQ9 949 aaKnown RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 DCUN1D1Q96GG9 259 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 PDLIM5Q96HC4 596 aaKnown RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 GPR78Q96P69 363 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 GPR21Q99679 349 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 TRMOQ9BU70 441 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 SPATA16Q9BXB7 569 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 ZCCHC2Q9C0B9 1178 aaKnown RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 SGK2Q9HBY8 427 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 ZNF358Q9NW07 568 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 KCNK4Q9NYG8 393 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 CPSF2Q9P2I0 782 aaKnown RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 SCML1Q9UN30 329 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 LRRK1Q38SD2 2015 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 CACNA1GO43497 2377 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 COL27A1Q8IZC6 1860 aaPredicted RBP9.59□□□□□ -0.87
UBFD1-203ENST00000564106 PIKFYVEQ9Y2I7 2098 aa9.59□□□□□ -0.87
UBFD1-203ENST00000564106 COL5A1P20908 1838 aaPredicted RBP9.59□□□□□ -0.88
UBFD1-203ENST00000564106 ACACAQ13085 2346 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 A8MX80 341 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 SLCO1B7G3V0H7 640 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 AREL1O15033 823 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 TSPAN6O43657 245 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 AP1G1O43747 822 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 NPHS1O60500 1241 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 KERAO60938 352 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 IPO13O94829 963 aaKnown RBP9.58□□□□□ -0.88
UBFD1-203ENST00000564106 HSPA4LO95757 839 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 ZNF883P0CG24 379 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 PRSS56P0CW18 603 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 ENO3P13929 434 aaPredicted RBP9.58□□□□□ -0.88
UBFD1-203ENST00000564106 C5AR1P21730 350 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 DGKAP23743 735 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 AKT1P31749 480 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 MAPK9P45984 424 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 CDKN1CP49918 316 aaPredicted RBP9.58□□□□□ -0.88
UBFD1-203ENST00000564106 GALNT1Q10472 559 aaPredicted RBP9.58□□□□□ -0.88
UBFD1-203ENST00000564106 RALGDSQ12967 914 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 BNIP3Q12983 259 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 SLC14A1Q13336 389 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 RCN2Q14257 317 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 ACOX1Q15067 660 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 PTPRRQ15256 657 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 TTC31Q49AM3 519 aaPredicted RBP9.58□□□□□ -0.88
UBFD1-203ENST00000564106 ATP13A5Q4VNC0 1218 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 SPDYAQ5MJ70 313 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 CTSL3PQ5NE16 218 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 PIP5KL1Q5T9C9 394 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.58□□□□□ -0.88
UBFD1-203ENST00000564106 CCDC121Q6ZUS5 278 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 GLRX5Q86SX6 157 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 ADAMTSL2Q86TH1 951 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 PIM3Q86V86 326 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 NLRP8Q86W28 1048 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 PHYKPLQ8IUZ5 450 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 MYO1HQ8N1T3 1032 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 DDHD1Q8NEL9 900 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 OR6Y1Q8NGX8 325 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 OR14C36Q8NHC7 312 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 CD200R1Q8TD46 325 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 CXorf40AQ8TE69 158 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 INPP5DQ92835 1189 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 KLK6Q92876 244 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 KIAA1191Q96A73 305 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 AP2M1Q96CW1 435 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 DTD2Q96FN9 168 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 MYOCQ99972 504 aa9.58□□□□□ -0.88
UBFD1-203ENST00000564106 ZDHHC5Q9C0B5 715 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms