RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 CCR10P46092 362 aa21.5■■□□□ 1.03
LINC01960-201ENST00000563759 CCR5P51681 352 aa21.5■■□□□ 1.03
LINC01960-201ENST00000563759 ARHGAP8P85298 464 aa21.5■■□□□ 1.03
LINC01960-201ENST00000563759 ARL13AQ5H913 290 aaPredicted RBP21.5■■□□□ 1.03
LINC01960-201ENST00000563759 FRMD7Q6ZUT3 714 aa21.5■■□□□ 1.03
LINC01960-201ENST00000563759 C11orf96Q7Z7L8 435 aa21.5■■□□□ 1.03
LINC01960-201ENST00000563759 AMZ2Q86W34 360 aa21.5■■□□□ 1.03
LINC01960-201ENST00000563759 SLC22A15Q8IZD6 547 aa21.5■■□□□ 1.03
LINC01960-201ENST00000563759 PIWIL2Q8TC59 973 aaKnown RBP21.5■■□□□ 1.03
LINC01960-201ENST00000563759 CNDP1Q96KN2 507 aa21.5■■□□□ 1.03
LINC01960-201ENST00000563759 MOSPD1Q9UJG1 213 aa21.5■■□□□ 1.03
LINC01960-201ENST00000563759 STX16-NPEPL1H3BU86 382 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 STX16O14662 325 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 KMOO15229 486 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 ZNF658BQ4V348 819 aaPredicted RBP21.49■■□□□ 1.03
LINC01960-201ENST00000563759 FBXO48Q5FWF7 155 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 CAMKK1Q8N5S9 505 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 FRMD1Q8N878 549 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 ASB11Q8WXH4 323 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 DLG3Q92796 817 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 TRIM54Q9BYV2 358 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 DCTN4Q9UJW0 460 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 SLC17A4Q9Y2C5 497 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 LRP4O75096 1905 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 ENO2P09104 434 aaPredicted RBP21.49■■□□□ 1.03
LINC01960-201ENST00000563759 CYP2A7P20853 494 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 CXCL12P48061 93 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 KIAA1024LP59773 190 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 PLOD1Q02809 727 aaPredicted RBP21.49■■□□□ 1.03
LINC01960-201ENST00000563759 NFE2L1Q14494 772 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 SETDB1Q15047 1291 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 ATG14Q6ZNE5 492 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 RPS27LQ71UM5 84 aaKnown RBP21.49■■□□□ 1.03
LINC01960-201ENST00000563759 WDR75Q8IWA0 830 aaKnown RBP21.49■■□□□ 1.03
LINC01960-201ENST00000563759 OXR1Q8N573 874 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 PDPRQ8NCN5 879 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 CFAP61Q8NHU2 1237 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 AGR3Q8TD06 166 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 SNX19Q92543 992 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 BIRC7Q96CA5 298 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 FOPNLQ96NB1 174 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 NECAB3Q96P71 396 aaPredicted RBP21.49■■□□□ 1.03
LINC01960-201ENST00000563759 SHCBP1LQ9BZQ2 653 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 ILKAPQ9H0C8 392 aaPredicted RBP21.49■■□□□ 1.03
LINC01960-201ENST00000563759 GSTO2Q9H4Y5 243 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 RMI1Q9H9A7 625 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 RDH14Q9HBH5 336 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 PARVBQ9HBI1 364 aa21.49■■□□□ 1.03
LINC01960-201ENST00000563759 LRRC14BA6NHZ5 514 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 SNUPNO95149 360 aaKnown RBP21.48■■□□□ 1.03
LINC01960-201ENST00000563759 CEACAM5P06731 702 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 HIST1H2AGP0C0S8 130 aaPredicted RBP21.48■■□□□ 1.03
LINC01960-201ENST00000563759 HIST1H2ADP20671 130 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 KELP23276 732 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 PDHA2P29803 388 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 MAPK9P45984 424 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 RPIAP49247 311 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 ABRQ12979 859 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 PRKAA1Q13131 559 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 UNC50Q53HI1 259 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 GCNT7Q6ZNI0 430 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 GALNT13Q8IUC8 556 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 ZNF781Q8N8C0 355 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 HIST1H2AHQ96KK5 128 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 HIST1H2AJQ99878 128 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 IER2Q9BTL4 223 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 H2AFJQ9BTM1 129 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 TRMOQ9BU70 441 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 SLC12A9Q9BXP2 914 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 EBF2Q9HAK2 575 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 EML4Q9HC35 981 aaKnown RBP21.48■■□□□ 1.03
LINC01960-201ENST00000563759 TM7SF3Q9NS93 570 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 ARL15Q9NXU5 204 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 RAP2CQ9Y3L5 183 aa21.48■■□□□ 1.03
LINC01960-201ENST00000563759 A0A0G2JND7 137 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 C10orf142B7Z368 130 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 PRAMEF26H0Y7S4 382 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 SLC16A5O15375 505 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 NDUFS2O75306 463 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 MATN4O95460 622 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 MPSTP25325 297 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 HTR1BP28222 390 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 AGTR2P50052 363 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 SIGLEC14Q08ET2 396 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 NFATC4Q14934 902 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 CHST15Q7LFX5 561 aaPredicted RBP21.47■■□□□ 1.03
LINC01960-201ENST00000563759 RFWD2Q8NHY2 731 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 WWOXQ9NZC7 414 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 DMTF1Q9Y222 760 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 PDE10AQ9Y233 779 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 ARL2BPQ9Y2Y0 163 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 DNMT3AQ9Y6K1 912 aaPredicted RBP21.47■■□□□ 1.03
LINC01960-201ENST00000563759 GON4LQ3T8J9 2241 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 CACNA1IQ9P0X4 2223 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 KLHL33A6NCF5 533 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 HOXC4P09017 264 aaPredicted RBP21.47■■□□□ 1.03
LINC01960-201ENST00000563759 MAP4P27816 1152 aaKnown RBP21.47■■□□□ 1.03
LINC01960-201ENST00000563759 CCR3P51677 355 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 THOP1P52888 689 aa21.47■■□□□ 1.03
LINC01960-201ENST00000563759 ANKS6Q68DC2 871 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms