RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 SLC45A3Q96JT2 553 aa16.43■□□□□ 0.22
CLK3-210ENST00000563112 SLC41A2Q96JW4 573 aa16.43■□□□□ 0.22
CLK3-210ENST00000563112 FERD3LQ96RJ6 166 aa16.43■□□□□ 0.22
CLK3-210ENST00000563112 SEMA4CQ9C0C4 833 aa16.43■□□□□ 0.22
CLK3-210ENST00000563112 SEMA5BQ9P283 1151 aa16.43■□□□□ 0.22
CLK3-210ENST00000563112 RARRES3Q9UL19 164 aa16.43■□□□□ 0.22
CLK3-210ENST00000563112 IGHV5-51A0A0C4DH38 117 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 OR6C74A6NCV1 312 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 TLCD2A6NGC4 264 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 F8W8V4 182 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 MT-ND3P03897 115 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 CCNYL3P0C7X3 344 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 PRSS56P0CW18 603 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 FGF5P12034 268 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 ADRA1DP25100 572 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 PSMA3P25788 255 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 CD151P48509 253 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 PPP1CAP62136 330 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 MC1RQ01726 317 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 SEMA5AQ13591 1074 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 DBN1Q16643 649 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.42■□□□□ 0.22
CLK3-210ENST00000563112 CCDC38Q502W7 563 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 LYPLAL1Q5VWZ2 237 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 NLRP9Q7RTR0 991 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 PIANPQ8IYJ0 282 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 CLDN19Q8N6F1 224 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 EXD3Q8N9H8 876 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 ACVR1CQ8NER5 493 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 TRIM58Q8NG06 486 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 LCN9Q8WX39 176 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 STAMBPL1Q96FJ0 436 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 CATSPER2Q96P56 530 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 RANBP9Q96S59 729 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 MAP3K3Q99759 626 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 LNPEPQ9UIQ6 1025 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 DRG1Q9Y295 367 aaKnown RBP16.42■□□□□ 0.22
CLK3-210ENST00000563112 ZKSCAN5Q9Y2L8 839 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 SPTA1P02549 2419 aa16.42■□□□□ 0.22
CLK3-210ENST00000563112 PIKFYVEQ9Y2I7 2098 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 TLN1Q9Y490 2541 aaKnown RBP16.41■□□□□ 0.22
CLK3-210ENST00000563112 CCDC162PA2VCL2 907 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 MATN2O00339 956 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 SPAG6O75602 509 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 KIAA0754O94854 1291 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 FTH1P02794 183 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 APRTP07741 180 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 ETS1P14921 441 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 PPARGP37231 505 aaPredicted RBP16.41■□□□□ 0.22
CLK3-210ENST00000563112 STAT5AP42229 794 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 HSD11B2P80365 405 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 TUBB3Q13509 450 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 TMTC4Q5T4D3 741 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 TSTD2Q5T7W7 516 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 DRICH1Q6PGQ1 229 aaPredicted RBP16.41■□□□□ 0.22
CLK3-210ENST00000563112 BORAQ6PGQ7 559 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 C4orf22Q6V702 233 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 GSTA5Q7RTV2 222 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 UNC5BQ8IZJ1 945 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 CARFQ8N187 725 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 GALNT6Q8NCL4 622 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 OR4E2Q8NGC2 313 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 FCRL4Q96PJ5 515 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 OR52A5Q9H2C5 316 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 SRMSQ9H3Y6 488 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 MVB12BQ9H7P6 319 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 RIMKLBQ9ULI2 386 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 RPS6KL1Q9Y6S9 549 aa16.41■□□□□ 0.22
CLK3-210ENST00000563112 B8ZZF3 427 aa16.4■□□□□ 0.22
CLK3-210ENST00000563112 LIN7AO14910 233 aaPredicted RBP16.4■□□□□ 0.22
CLK3-210ENST00000563112 ZBTB11O95625 1053 aaPredicted RBP16.4■□□□□ 0.22
CLK3-210ENST00000563112 FGGP02679 453 aa16.4■□□□□ 0.22
CLK3-210ENST00000563112 OR56A5P0C7T3 313 aa16.4■□□□□ 0.22
CLK3-210ENST00000563112 ZNF28P17035 718 aa16.4■□□□□ 0.22
CLK3-210ENST00000563112 POLR2CP19387 275 aaPredicted RBP16.4■□□□□ 0.22
CLK3-210ENST00000563112 AFTPHQ6ULP2 937 aa16.4■□□□□ 0.22
CLK3-210ENST00000563112 CERS6Q6ZMG9 384 aa16.4■□□□□ 0.22
CLK3-210ENST00000563112 PPHLN1Q8NEY8 458 aaKnown RBP16.4■□□□□ 0.22
CLK3-210ENST00000563112 OR6P1Q8NGX9 317 aa16.4■□□□□ 0.22
CLK3-210ENST00000563112 HDAC10Q969S8 669 aa16.4■□□□□ 0.22
CLK3-210ENST00000563112 CASS4Q9NQ75 786 aa16.4■□□□□ 0.22
CLK3-210ENST00000563112 HOMER3Q9NSC5 361 aa16.4■□□□□ 0.22
CLK3-210ENST00000563112 GOLGA6L3A6NEY3 463 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 OR51F1A6NGY5 319 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 AP3B1O00203 1094 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 NKX2-8O15522 239 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 MAP3K7O43318 606 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 CEP104O60308 925 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 FAM87AP0C7U9 286 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 EBLN1P0CF75 366 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 FOLR1P15328 257 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 TCN2P20062 427 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 CDH3P22223 829 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 PDHA2P29803 388 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 FOXN2P32314 431 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 RPL22P35268 128 aaKnown RBP16.39■□□□□ 0.21
CLK3-210ENST00000563112 GRIA1P42261 906 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 CCR10P46092 362 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 PREPP48147 710 aa16.39■□□□□ 0.21
CLK3-210ENST00000563112 ARCN1P48444 511 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms