RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 SPATA16Q9BXB7 569 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 WNT6Q9Y6F9 365 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 C15orf38-AP3S2A0A0A6YYH1 394 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 PABPN1LA6NDY0 278 aaKnown RBP20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 EIF4E1BA6NMX2 242 aaKnown RBP20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 ATP1B2P14415 290 aaPredicted RBP20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 CCR7P32248 378 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 HTR6P50406 440 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 MAD2L1Q13257 205 aaPredicted RBP20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 IL23RQ5VWK5 629 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 CAPRIN2Q6IMN6 1127 aaKnown RBP20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 PRR23BQ6ZRT6 265 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 ARPINQ7Z6K5 226 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 GALNT13Q8IUC8 556 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 LILRA2Q8N149 483 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 KIAA1958Q8N8K9 716 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 OR2T34Q8NGX1 318 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 OR2T3Q8NH03 318 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 HCAR2Q8TDS4 363 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 WFIKKN2Q8TEU8 576 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 FRS2Q8WU20 508 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 SLC29A3Q9BZD2 475 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 FAM83DQ9H4H8 585 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 DLGAP2Q9P1A6 1054 aa20.95■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 AQP12BA6NM10 295 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 UPK3BL1B0FP48 263 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 UPK3BL2E5RIL1 263 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 LSM1O15116 133 aaKnown RBP20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 SLC16A5O15375 505 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 NUAK1O60285 661 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 STK16O75716 305 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 AP2A2O94973 939 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 ASLP04424 464 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 LYNP07948 512 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 SRPRAP08240 638 aaKnown RBP20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 SLC6A2P23975 617 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 AKT1P31749 480 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 NTHL1P78549 312 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 SP140Q13342 867 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 PLEKHS1Q5SXH7 462 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 RFLNAQ6ZTI6 216 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 GRASPQ7Z6J2 395 aaPredicted RBP20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 ZFAND4Q86XD8 727 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 AQP12AQ8IXF9 295 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 TMEM102Q8N9M5 508 aaPredicted RBP20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 TIFAQ96CG3 184 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 MRGPRX3Q96LB0 322 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 ZSWIM3Q96MP5 696 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 PDP2Q9P2J9 529 aa20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 NFKBIL1Q9UBC1 381 aaPredicted RBP20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 CNOT11Q9UKZ1 510 aaKnown RBP20.94■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 C9JVG2 144 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 C5orf67F2Z3F1 127 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 RNASEH2AO75792 299 aaKnown RBP20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 ARHGEF15O94989 841 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 UBTFL6P0CB48 400 aaPredicted RBP20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 XPAP23025 273 aaPredicted RBP20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 ZFP36L2P47974 494 aaKnown RBP20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 GBX1Q14549 363 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 ABRAXAS2Q15018 415 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 AP5B1Q2VPB7 878 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 TMEM215Q68D42 235 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 TICAM1Q8IUC6 712 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 NAT16Q8N8M0 369 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 LRCH3Q96II8 777 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 SLC12A9Q9BXP2 914 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 PARVBQ9HBI1 364 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 CMTM6Q9NX76 183 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 ARL15Q9NXU5 204 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 DKK3Q9UBP4 350 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 IL36AQ9UHA7 158 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 RAB26Q9ULW5 256 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 EIF3LQ9Y262 564 aaKnown RBP20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 PCDHA9Q9Y5H5 950 aa20.93■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 LEFTY1O75610 366 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 RB1P06400 928 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 HIST1H2AGP0C0S8 130 aaPredicted RBP20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 HIST1H2ADP20671 130 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 GGT5P36269 586 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 RPIAP49247 311 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 FOLH1Q04609 750 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 CAPRIN1Q14444 709 aaKnown RBP20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 INPP5AQ14642 412 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 ARSIQ5FYB1 569 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 NEK10Q6ZWH5 1172 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 UBE2R2Q712K3 238 aaPredicted RBP20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 LRRC70Q7Z2Q7 622 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 CELF5Q8N6W0 485 aaKnown RBP20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 PROKR1Q8TCW9 393 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 VPS33AQ96AX1 596 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 HIST1H2AHQ96KK5 128 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 TEX37Q96LM6 180 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 UHRF1Q96T88 793 aaPredicted RBP20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 HIST1H2AJQ99878 128 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 H2AFJQ9BTM1 129 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 FBXO10Q9UK96 956 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 MRPS23Q9Y3D9 190 aaKnown RBP20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 LINC01553A4QN01 128 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 DPPA5A6NC42 116 aa20.92■□□□□ 0.94
VPS9D1-AS1-202ENST00000562866 TTC34A8MYJ7 566 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms