RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 FILIP1LQ4L180 1135 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 KAZNQ674X7 775 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 PDPK2PQ6A1A2 396 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 ALKBH5Q6P6C2 394 aaKnown RBP11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 CYB5D1Q6P9G0 228 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 KLHL35Q6PF15 583 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 SPOCD1Q6ZMY3 1216 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 GLT6D1Q7Z4J2 308 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 MRGPREQ86SM8 312 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 CUZD1Q86UP6 607 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 CFAP206Q8IYR0 622 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 LMNTD1Q8N9Z9 388 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 IPMKQ8NFU5 416 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 MARVELD3Q96A59 401 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 APOL2Q9BQE5 337 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 SPRTNQ9H040 489 aaPredicted RBP11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 SLC25A51Q9H1U9 297 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 G3BP2Q9UN86 482 aaKnown RBP11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 OSGIN2Q9Y236 505 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 PTRH2Q9Y3E5 179 aaKnown RBP11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 ARL5AQ9Y689 179 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 C2CD3Q4AC94 2353 aa11.35□□□□□ -0.59
NSMCE1-202ENST00000561960 A0A0A6YYK5 440 aaPredicted RBP11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 A0A1B0GTH6 734 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 SSU72P8A0A1W2PR75 194 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 C3orf70A6NLC5 250 aaPredicted RBP11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 ZG16O60844 167 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 CNOT3O75175 753 aaKnown RBP11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 RECKO95980 971 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 SERPINC1P01008 464 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 SNRPB2P08579 225 aaKnown RBP11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 SLC35G4P0C7Q5 338 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 PRSS56P0CW18 603 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 PECAM1P16284 738 aaPredicted RBP11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 MSH3P20585 1137 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 GSDMDP57764 484 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 ZRANB3Q5FWF4 1079 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 CCDC70Q6NSX1 233 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 SHISA6Q6ZSJ9 500 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 CDHR3Q6ZTQ4 885 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 CCDC50Q8IVM0 306 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 MAP7D3Q8IWC1 876 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 FAM20CQ8IXL6 584 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 SEC14L1Q92503 715 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 FATE1Q969F0 183 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 TADA1Q96BN2 335 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 OXNAD1Q96HP4 312 aaPredicted RBP11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 FERD3LQ96RJ6 166 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 SMAD5Q99717 465 aaKnown RBP11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 MESP1Q9BRJ9 268 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 HGH1Q9BTY7 390 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 KIR3DX1Q9H7L2 352 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 FANCEQ9HB96 536 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 RAD18Q9NS91 495 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 NFKBIL1Q9UBC1 381 aaPredicted RBP11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 DHCR7Q9UBM7 475 aaKnown RBP11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 POMT2Q9UKY4 750 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 B3GNT3Q9Y2A9 372 aa11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 COPG1Q9Y678 874 aaKnown RBP11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 SETD2Q9BYW2 2564 aaPredicted RBP11.34□□□□□ -0.59
NSMCE1-202ENST00000561960 F8P00451 2351 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 SERPING1P05155 500 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 RAB40ALP0C0E4 278 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 DMPKQ09013 629 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 LDLRAP1Q5SW96 308 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 VWA5B1Q5TIE3 1220 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 METRNLQ641Q3 311 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 KDELC1Q6UW63 502 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 NAPRTQ6XQN6 538 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 MED25Q71SY5 747 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 ZC3H18Q86VM9 953 aaKnown RBP11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 KMT5CQ86Y97 462 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 RAVER1Q8IY67 606 aaKnown RBP11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 GALNT16Q8N428 558 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 DDHD1Q8NEL9 900 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 LCN9Q8WX39 176 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 RBM41Q96IZ5 413 aaKnown RBP11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 CNDP1Q96KN2 507 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 MRGPRX2Q96LB1 330 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 OLFM3Q96PB7 478 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 FCRL4Q96PJ5 515 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 MAK16Q9BXY0 300 aaKnown RBP11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 SRMSQ9H3Y6 488 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 FAM60AQ9NP50 221 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 IRAK4Q9NWZ3 460 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 IL17CQ9P0M4 197 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 TMEM63CQ9P1W3 806 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 CIDEBQ9UHD4 219 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 FKBPLQ9UIM3 349 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 PLAGL1Q9UM63 463 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 BTRCQ9Y297 605 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 KLHL20Q9Y2M5 609 aa11.33□□□□□ -0.6
NSMCE1-202ENST00000561960 POLEQ07864 2286 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 CCDC66A2RUB6 948 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 C9J4A7 227 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 SGTAO43765 313 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 KLF7O75840 302 aaPredicted RBP11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 PRAMEF1O95521 474 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 AGTP01019 485 aa11.32□□□□□ -0.6
NSMCE1-202ENST00000561960 PDHA2P29803 388 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms