RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 IRX3P78415 501 aaPredicted RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 GRSF1Q12849 480 aaKnown RBP eCLIP3.7□□□□□ -1.82
HERC1-215ENST00000561436 GAGE1Q13065 139 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 GAGE4Q13068 117 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 SPP2Q13103 211 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 GPS2Q13227 327 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 MVPQ14764 893 aaKnown RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 TMEM266Q2M3C6 531 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 TDRD12Q587J7 1177 aaKnown RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 ZNF805Q5CZA5 627 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 RARS2Q5T160 578 aaKnown RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 FRG2Q64ET8 278 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 PMS2CLQ68D20 193 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 FAM122CQ6P4D5 195 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 SLC36A4Q6YBV0 504 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 B3GNT6Q6ZMB0 384 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 CFAP77Q6ZQR2 320 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 G2E3Q7L622 706 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 ADGRA1Q86SQ6 560 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 PELI3Q8N2H9 469 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 SYT2Q8N9I0 419 aaPredicted RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 AVL9Q8NBF6 648 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 OIT3Q8WWZ8 545 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 FAM122AQ96E09 287 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 URB1-AS1Q96HZ7 61 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 C12orf42Q96LP6 360 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 OR1F2PQ96R84 312 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 ESRP2Q9H6T0 727 aaKnown RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 EPB41L5Q9HCM4 733 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 PDE7BQ9NP56 450 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 LTB4R2Q9NPC1 389 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.7□□□□□ -1.82
HERC1-215ENST00000561436 ACSS1Q9NUB1 689 aaPredicted RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 TAB2Q9NYJ8 693 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 MYO6Q9UM54 1294 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 INSL5Q9Y5Q6 135 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 COL2A1P02458 1487 aaPredicted RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 LAMB4A4D0S4 1761 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 TNRC18O15417 2968 aaPredicted RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 PFASO15067 1338 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 A6NL46 340 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 EIF4E1BA6NMX2 242 aaKnown RBP3.69□□□□□ -1.82
HERC1-215ENST00000561436 BECN2A8MW95 431 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 M0QZ24 198 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 SMAD9O15198 467 aaKnown RBP3.69□□□□□ -1.82
HERC1-215ENST00000561436 KCNJ13O60928 360 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 TOMM40O96008 361 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 ALPLP05186 524 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 PRSS2P07478 247 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 VPREB1P12018 145 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 HOXB2P14652 356 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 FOSL2P15408 326 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 BDKRB2P30411 391 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 COPB2P35606 906 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 EIF2S3P41091 472 aaKnown RBP3.69□□□□□ -1.82
HERC1-215ENST00000561436 MSH2P43246 934 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 FASLGP48023 281 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 LIG4P49917 911 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 MXI1P50539 228 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 PEX5P50542 639 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 PNLIPRP2P54317 469 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 SEC61BP60468 96 aaKnown RBP3.69□□□□□ -1.82
HERC1-215ENST00000561436 IFI35P80217 286 aaPredicted RBP3.69□□□□□ -1.82
HERC1-215ENST00000561436 TCP10Q12799 353 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 TRAF1Q13077 416 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 KRT33BQ14525 404 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 LRRC26Q2I0M4 334 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 EIF2S3LQ2VIR3 472 aaKnown RBP3.69□□□□□ -1.82
HERC1-215ENST00000561436 MYLK3Q32MK0 819 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 AMZ1Q400G9 498 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 FAM133BQ5BKY9 247 aaKnown RBP3.69□□□□□ -1.82
HERC1-215ENST00000561436 BMP2KLQ5H9B9 411 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 LRIF1Q5T3J3 769 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 PDXDC1Q6P996 788 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 Q7L0L9 218 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 GPR142Q7Z601 462 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 SDCCAG8Q86SQ7 713 aaPredicted RBP3.69□□□□□ -1.82
HERC1-215ENST00000561436 TSPAN33Q86UF1 283 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 CCDC190Q86UF4 302 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 DZIP1Q86YF9 867 aaKnown RBP3.69□□□□□ -1.82
HERC1-215ENST00000561436 OR1J2Q8NGS2 313 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 TRPC4APQ8TEL6 797 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 FAM216AQ8WUB2 273 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 ORAI1Q96D31 301 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 SERINC2Q96SA4 455 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 GAD1Q99259 594 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 SRSF8Q9BRL6 282 aaKnown RBP3.69□□□□□ -1.82
HERC1-215ENST00000561436 SLC25A33Q9BSK2 321 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 HAUS8Q9BT25 410 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 TXLNGYQ9BZA5 131 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 MTIF3Q9H2K0 278 aaKnown RBP3.69□□□□□ -1.82
HERC1-215ENST00000561436 HOXC10Q9NYD6 342 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 DBNLQ9UJU6 430 aaKnown RBP3.69□□□□□ -1.82
HERC1-215ENST00000561436 AGO1Q9UL18 857 aaKnown RBP3.69□□□□□ -1.82
HERC1-215ENST00000561436 PTGDR2Q9Y5Y4 395 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 CLIC4Q9Y696 253 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 TRPM7Q96QT4 1865 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 MROH7-TTC4A0A0A0MT08 1334 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 FANCIQ9NVI1 1328 aa3.69□□□□□ -1.82
HERC1-215ENST00000561436 ANKRD36CQ5JPF3 1778 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms