RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SLC35G4P0C7Q5 338 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 MTHFD1P11586 935 aaKnown RBP9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 NDUFS1P28331 727 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 PDHA2P29803 388 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 PBLDP30039 288 aaPredicted RBP9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 ATP5DP30049 168 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 CLCN7P51798 805 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 EIF3BP55884 814 aaKnown RBP9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 GPLD1P80108 840 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 MPP1Q00013 466 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 INSM1Q01101 510 aaPredicted RBP9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 SLMAPQ14BN4 828 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 CNSTQ6PJW8 725 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 TMEM26Q6ZUK4 368 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 TMPRSS7Q7RTY8 843 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 PDZD3Q86UT5 571 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 CCDC25Q86WR0 208 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 TMPRSS12Q86WS5 348 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 KRT222Q8N1A0 295 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 GALNT15Q8N3T1 639 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 LKAAEAR1Q8TD35 194 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 IFT81Q8WYA0 676 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 TMEM159Q96B96 161 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 GRAMD1AQ96CP6 724 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 RMDN2Q96LZ7 410 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 RHOXF2Q9BQY4 288 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 AARSD1Q9BTE6 412 aaKnown RBP9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 TWSG1Q9GZX9 223 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 SMYD2Q9NRG4 433 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 ZFATQ9P243 1243 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 PSMD13Q9UNM6 376 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 DHRS7Q9Y394 339 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 COLEC10Q9Y6Z7 277 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 ZFHX4Q86UP3 3567 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 EPG5Q9HCE0 2579 aa9.41□□□□□ -0.9
RABGGTA-221ENST00000561055 NCOR2Q9Y618 2525 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 MDC1Q14676 2089 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 TRBV23OR9-2A0A075B6M9 112 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 IGHV1OR21-1A0A087WYE8 117 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 A0A1W2PQM1 296 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 OR52A4PA6NMU1 304 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 EIF3FO00303 357 aaPredicted RBP9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 NIPSNAP2O75323 286 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 CBSLP0DN79 551 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 CD1CP29017 333 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 STX2P32856 288 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 CBSP35520 551 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 SKIV2L2P42285 1042 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 SHC2P98077 582 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 TIAL1Q01085 375 aaKnown RBP eCLIP9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 NAB1Q13506 487 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 BOP1Q14137 746 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 TMED2Q15363 201 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 SEPT7Q16181 437 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 KYNUQ16719 465 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 TEX35Q5T0J7 233 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 DHRS13Q6UX07 377 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 NEK10Q6ZWH5 1172 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 OTOAQ7RTW8 1153 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 ZC3HC1Q86WB0 502 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 RASGRP3Q8IV61 690 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 DCBLD1Q8N8Z6 715 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 SPDYE1Q8NFV5 336 aaPredicted RBP9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 TFGQ92734 400 aaPredicted RBP9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 CDKL2Q92772 493 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 CXorf40BQ96DE9 158 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 C12orf66Q96MD2 445 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 DPYSL5Q9BPU6 564 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 TXLNGYQ9BZA5 131 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 RAB33BQ9H082 229 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 CCDC68Q9H2F9 335 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 LRRN3Q9H3W5 708 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 KIR3DX1Q9H7L2 352 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 MVB12BQ9H7P6 319 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 PPANQ9NQ55 473 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 NINJ2Q9NZG7 142 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 PDP2Q9P2J9 529 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 GALPQ9UBC7 116 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 NFU1Q9UMS0 254 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 PSAT1Q9Y617 370 aa9.4□□□□□ -0.9
RABGGTA-221ENST00000561055 CXorf49A8MYA2 514 aaPredicted RBP9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 E5RI56 91 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 IFRD1O00458 451 aaPredicted RBP9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 VPS26AO75436 327 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 MATN4O95460 622 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 CPNE6O95741 557 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 ITGB6P18564 788 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 CHRM3P20309 590 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 PHBP35232 272 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 PREPP48147 710 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 CSE1LP55060 971 aaKnown RBP9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 OR1D5P58170 312 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 CCL7P80098 99 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 HSPA14Q0VDF9 509 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 BIRC2Q13490 618 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 GPR18Q14330 331 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 FAM45BPQ6NSW5 357 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 UGT3A1Q6NUS8 523 aa9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 WDR74Q6RFH5 385 aaPredicted RBP9.39□□□□□ -0.91
RABGGTA-221ENST00000561055 UNC5DQ6UXZ4 953 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms