RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 ADGRG6Q86SQ4 1221 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 FAM71AQ8IYT1 594 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 CCDC110Q8TBZ0 833 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 ADAMTS18Q8TE60 1221 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 SMIM14Q96QK8 99 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 C11orf70Q9BRQ4 267 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 ZSCAN5AQ9BUG6 496 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 MRM3Q9HC36 420 aaKnown RBP9.24□□□□□ -0.93
HERC1-210ENST00000560897 DNAJB12Q9NXW2 375 aaKnown RBP9.24□□□□□ -0.93
HERC1-210ENST00000560897 CDYLQ9Y232 598 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 WDR37Q9Y2I8 494 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 ZDHHC9Q9Y397 364 aa9.24□□□□□ -0.93
HERC1-210ENST00000560897 MRPS2Q9Y399 296 aaKnown RBP9.24□□□□□ -0.93
HERC1-210ENST00000560897 FAM237AA0A1B0GTK4 181 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 C17orf113A0A1B0GUU1 675 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 EIF3CLB5ME19 914 aaKnown RBP9.23□□□□□ -0.93
HERC1-210ENST00000560897 CCP110O43303 1012 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 KCNJ13O60928 360 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 OR2B3O76000 313 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 USP1O94782 785 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 MSL3P1P0C860 447 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 ABOP16442 354 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 POLR2CP19387 275 aaPredicted RBP9.23□□□□□ -0.93
HERC1-210ENST00000560897 PCSK6P29122 969 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 RBBP7Q16576 425 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 PPP1R15BQ5SWA1 713 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 MARC1Q5VT66 337 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 ALS2CLQ60I27 953 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 RFX8Q6ZV50 586 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 HOOK3Q86VS8 718 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 SPPL2CQ8IUH8 684 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 ARHGAP12Q8IWW6 846 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 PGBD5Q8N414 524 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 PHF10Q8WUB8 498 aaKnown RBP9.23□□□□□ -0.93
HERC1-210ENST00000560897 NELFBQ8WX92 580 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 GLYATL1Q969I3 302 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 RMND5BQ96G75 393 aaPredicted RBP9.23□□□□□ -0.93
HERC1-210ENST00000560897 PPM1MQ96MI6 270 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 TTC25Q96NG3 672 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 EIF3CQ99613 913 aaKnown RBP9.23□□□□□ -0.93
HERC1-210ENST00000560897 NAA15Q9BXJ9 866 aaKnown RBP9.23□□□□□ -0.93
HERC1-210ENST00000560897 DHX35Q9H5Z1 703 aaKnown RBP9.23□□□□□ -0.93
HERC1-210ENST00000560897 HAUS2Q9NVX0 235 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 PLA2G3Q9NZ20 509 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 PSMD13Q9UNM6 376 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 AP4E1Q9UPM8 1137 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 PLEKHA6Q9Y2H5 1048 aa9.23□□□□□ -0.93
HERC1-210ENST00000560897 FAM227AF5H4B4 570 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 MTX2O75431 263 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 KLHL18O94889 574 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 SLCO2B1O94956 709 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 MMEP08473 750 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 MTHFD1P11586 935 aaKnown RBP9.22□□□□□ -0.93
HERC1-210ENST00000560897 UNGP13051 313 aaPredicted RBP9.22□□□□□ -0.93
HERC1-210ENST00000560897 ERCC2P18074 760 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 ITGAXP20702 1163 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 PTMSP20962 102 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 MMP8P22894 467 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 PON1P27169 355 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 FOXL2P58012 376 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 PPP2R2BQ00005 443 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 GALNT3Q14435 633 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 KRT33BQ14525 404 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 NKAIN1Q4KMZ8 207 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 PDPK2PQ6A1A2 396 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 RHBDD2Q6NTF9 364 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 TTI2Q6NXR4 508 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 MRPL14Q6P1L8 145 aaKnown RBP9.22□□□□□ -0.93
HERC1-210ENST00000560897 AMZ2Q86W34 360 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 ATPAF2Q8N5M1 289 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 NPWQ8N729 165 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 ACRBPQ8NEB7 543 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 LPCAT1Q8NF37 534 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 GDAP1Q8TB36 358 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 ARSGQ96EG1 525 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 WDR24Q96S15 920 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 POLDIP3Q9BY77 421 aaKnown RBP9.22□□□□□ -0.93
HERC1-210ENST00000560897 POLR1EQ9GZS1 481 aaKnown RBP9.22□□□□□ -0.93
HERC1-210ENST00000560897 NT5MQ9NPB1 228 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 RAD18Q9NS91 495 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 PTGFRNQ9P2B2 879 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 HOOK1Q9UJC3 728 aaKnown RBP9.22□□□□□ -0.93
HERC1-210ENST00000560897 POMT2Q9UKY4 750 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 PPT2Q9UMR5 302 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 CTNND2Q9UQB3 1225 aa9.22□□□□□ -0.93
HERC1-210ENST00000560897 CFAP20Q9Y6A4 193 aaKnown RBP9.22□□□□□ -0.93
HERC1-210ENST00000560897 VPS13CQ709C8 3753 aa9.21□□□□□ -0.93
HERC1-210ENST00000560897 GTPBP10A4D1E9 387 aaKnown RBP9.21□□□□□ -0.94
HERC1-210ENST00000560897 SOCS6O14544 535 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 ZSCAN9O15535 394 aaPredicted RBP9.21□□□□□ -0.94
HERC1-210ENST00000560897 FZD6O60353 706 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 TSPAN12O95859 305 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 F10P00742 488 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 PIM1P11309 404 aaPredicted RBP9.21□□□□□ -0.94
HERC1-210ENST00000560897 ST6GAL1P15907 406 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 IGFBP2P18065 325 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 NDUFS1P28331 727 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 ZNF143P52747 638 aaPredicted RBP9.21□□□□□ -0.94
HERC1-210ENST00000560897 CDH6P55285 790 aa9.21□□□□□ -0.94
HERC1-210ENST00000560897 GTF3C1Q12789 2109 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms