RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ZNF534Q76KX8 674 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 ARHGAP22Q7Z5H3 698 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 LDB1Q86U70 411 aaPredicted RBP12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 OOSP2Q86WS3 158 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 PHC3Q8NDX5 983 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 CPT1BQ92523 772 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 MFSD3Q96ES6 412 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 NAPGQ99747 312 aaPredicted RBP12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 ASPSCR1Q9BZE9 553 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 KIR3DX1Q9H7L2 352 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 CPNE5Q9HCH3 593 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 HRASLS2Q9NWW9 162 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 ASIC3Q9UHC3 531 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 SLC24A2Q9UI40 661 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 B3GALT1Q9Y5Z6 326 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 LAMA5O15230 3695 aa12.66□□□□□ -0.38
CTDSPL2-209ENST00000560620 PIKFYVEQ9Y2I7 2098 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 UBA6A0AVT1 1052 aaPredicted RBP12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 B4E171 279 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 STMND1H3BQB6 276 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 POLR1CO15160 346 aaPredicted RBP12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 PFDN6O15212 129 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 C9P02748 559 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 PAMP19021 973 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 TSPAN7P41732 249 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 PAFAH1B1P43034 410 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 PRKAA1Q13131 559 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 RPA4Q13156 261 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 PRKG2Q13237 762 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 SEMA3AQ14563 771 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 DNTTIP2Q5QJE6 756 aaKnown RBP12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 CAPRIN2Q6IMN6 1127 aaKnown RBP12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 CEACAM20Q6UY09 585 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 CCDC81Q6ZN84 652 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 SDCCAG8Q86SQ7 713 aaPredicted RBP12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 KLHL7Q8IXQ5 586 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 ACVR1CQ8NER5 493 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 OR4E2Q8NGC2 313 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 GSDMBQ8TAX9 411 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 ZFPM2Q8WW38 1151 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 LCN9Q8WX39 176 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 TFGQ92734 400 aaPredicted RBP12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 PMEPA1Q969W9 287 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 CCNL2Q96S94 520 aaPredicted RBP12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 HGH1Q9BTY7 390 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 DDA1Q9BW61 102 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 DDX47Q9H0S4 455 aaKnown RBP12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 OR52A5Q9H2C5 316 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 SRMSQ9H3Y6 488 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 TREX1Q9NSU2 369 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 MARCH4Q9P2E8 410 aaPredicted RBP12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 SOX13Q9UN79 622 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 ASF1AQ9Y294 204 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 SAR1BQ9Y6B6 198 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 MAD1L1Q9Y6D9 718 aa12.65□□□□□ -0.38
CTDSPL2-209ENST00000560620 GSAPA4D1B5 854 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 SDR42E2A6NKP2 422 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 GOLGA8KD6RF30 607 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 GOLGA8TH3BQL2 631 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 TOX3O15405 576 aaPredicted RBP12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 TMEM63AO94886 807 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 ANKRD34CP0C6C1 535 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 CD82P27701 267 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 ARCN1P48444 511 aaKnown RBP12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 CD151P48509 253 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 ATP1A2P50993 1020 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 PPP1CAP62136 330 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 MC2RQ01718 297 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 HSPA14Q0VDF9 509 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 MANEAQ5SRI9 462 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 MRNIPQ6NTE8 343 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 GPR155Q7Z3F1 870 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 PPIL6Q8IXY8 311 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 MPP5Q8N3R9 675 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 IL22RA1Q8N6P7 574 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 SKA2Q8WVK7 121 aaPredicted RBP12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 SGSM3Q96HU1 749 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 ELMO2Q96JJ3 720 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 TEFMQ96QE5 360 aaKnown RBP12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 OR6C1Q96RD1 312 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 KIFC1Q9BW19 673 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 ZNF768Q9H5H4 540 aaKnown RBP12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 MRM3Q9HC36 420 aaKnown RBP12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 XAB2Q9HCS7 855 aaKnown RBP12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 GNPTGQ9UJJ9 305 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 ACSL6Q9UKU0 697 aa12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 TDRKHQ9Y2W6 561 aaKnown RBP12.64□□□□□ -0.39
CTDSPL2-209ENST00000560620 OR5K3A6NET4 321 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 IQCF5A8MTL0 148 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 PRMT5O14744 637 aaPredicted RBP12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 APOA4P06727 396 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 MLNP12872 115 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 POLR2CP19387 275 aaPredicted RBP12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 MAGEA6P43360 314 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 EIF3BP55884 814 aaKnown RBP12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 SH3BP2P78314 561 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 PLOD1Q02809 727 aaPredicted RBP12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 VAC14Q08AM6 782 aa12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 THOC5Q13769 683 aaKnown RBP12.63□□□□□ -0.39
CTDSPL2-209ENST00000560620 DHX34Q14147 1143 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms