RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 EDN3P14138 238 aa17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 CTSCP53634 463 aa17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 PDK2Q15119 407 aa17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 CYP2A13Q16696 494 aa17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 ANO6Q4KMQ2 910 aa17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 METRNLQ641Q3 311 aa17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 OR4E2Q8NGC2 313 aa17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 COG1Q8WTW3 980 aa17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 WDR77Q9BQA1 342 aaPredicted RBP17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 ISCUQ9H1K1 167 aa17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 P4HTMQ9NXG6 502 aa17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 POMT2Q9UKY4 750 aa17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 ACSL5Q9ULC5 683 aa17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 PCSK5Q92824 1860 aa17.31■□□□□ 0.36
TSPAN3-208ENST00000560514 NDST3O95803 873 aa17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 TNNT3P45378 269 aaPredicted RBP17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 IFI35P80217 286 aaPredicted RBP17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 AP1B1Q10567 949 aa17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 LONRF2Q1L5Z9 754 aa17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 IRAK1BP1Q5VVH5 260 aa17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 SPOCD1Q6ZMY3 1216 aa17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 GDF7Q7Z4P5 450 aa17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 FJX1Q86VR8 437 aa17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 CNTD1Q8N815 330 aa17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 GRHL3Q8TE85 626 aa17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 IMP4Q96G21 291 aaKnown RBP17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 AGAP3Q96P47 875 aa17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 TRAPPC9Q96Q05 1148 aa17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 SRMSQ9H3Y6 488 aa17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 FAM8A1Q9UBU6 413 aa17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 NOVA2Q9UNW9 492 aaKnown RBP17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 HEBP2Q9Y5Z4 205 aa17.3■□□□□ 0.36
TSPAN3-208ENST00000560514 A0A1B0GTH6 734 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 AURKAO14965 403 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 KLF7O75840 302 aaPredicted RBP17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 MSL3P1P0C860 447 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 MSH3P20585 1137 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 AKT1P31749 480 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 HMGCLP35914 325 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 SPAM1P38567 509 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 LMAN1P49257 510 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 ARSEP51690 589 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 PPIDQ08752 370 aaKnown RBP17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 CDC16Q13042 620 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 ZBTB17Q13105 803 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 ITGA9Q13797 1035 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 NR1I3Q14994 352 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 ZNF789Q5FWF6 425 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 FIGNQ5HY92 759 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 FNBP1LQ5T0N5 605 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 FAM151BQ6UXP7 276 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 HOOK3Q86VS8 718 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 DNAJB14Q8TBM8 379 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 PPP4R1Q8TF05 950 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 GBP5Q96PP8 586 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 CEP41Q9BYV8 373 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 SLC25A51Q9H1U9 297 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 ZBTB20Q9HC78 741 aaPredicted RBP17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 IFT80Q9P2H3 777 aaPredicted RBP17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 ITGB1BP2Q9UKP3 347 aa17.29■□□□□ 0.36
TSPAN3-208ENST00000560514 KLHL33A6NCF5 533 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 MGAT4DA6NG13 374 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 PRDX3P30048 256 aaKnown RBP17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 SOX8P57073 446 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 SLC10A2Q12908 348 aaPredicted RBP17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 AIMP2Q13155 320 aaKnown RBP17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 HIF1AQ16665 826 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 ATP13A4Q4VNC1 1196 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 DET1Q7L5Y6 550 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 DDHD1Q8NEL9 900 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 ACVR1CQ8NER5 493 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 FAR1Q8WVX9 515 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 LCN9Q8WX39 176 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 PTERQ96BW5 349 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 CNDP1Q96KN2 507 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 THAP2Q9H0W7 228 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 TRABDQ9H4I3 376 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 IL26Q9NPH9 171 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 HEY1Q9Y5J3 304 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 SPO11Q9Y5K1 396 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 BZW2Q9Y6E2 419 aaKnown RBP17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 AP1M2Q9Y6Q5 423 aa17.28■□□□□ 0.36
TSPAN3-208ENST00000560514 CNTRLQ7Z7A1 2325 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 GLYATL1P3A0A0U1RQE8 302 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 A0A1W2PQJ5 194 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 UGT1A9O60656 530 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 PMPCBO75439 489 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 PYGMP11217 842 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 SKILP12757 684 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 ST6GAL1P15907 406 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 UGT1A6P19224 532 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 UGT1A1P22309 533 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 UGT1A4P22310 534 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 TSFMP43897 325 aaKnown RBP17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 GPRC6AQ5T6X5 926 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 C1orf189Q5VU69 101 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 FAM180AQ6UWF9 173 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 SPDYE1Q8NFV5 336 aaPredicted RBP17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 OR2Y1Q8NGV0 311 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms