RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 ITGA3P26006 1051 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 CBSP35520 551 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 FOLR3P41439 243 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 IFI35P80217 286 aaPredicted RBP16.11■□□□□ 0.17
HERC1-207ENST00000560316 C1orf189Q5VU69 101 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 B4GALNT4Q76KP1 1039 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 NT5DC3Q86UY8 548 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 SPATA22Q8NHS9 363 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 ZFPM2Q8WW38 1151 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 AGAP3Q96P47 875 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 NRTNQ99748 197 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 ZNF670Q9BS34 389 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 ZCCHC2Q9C0B9 1178 aaKnown RBP16.11■□□□□ 0.17
HERC1-207ENST00000560316 THAP2Q9H0W7 228 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 CBX8Q9HC52 389 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 SYTL2Q9HCH5 934 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 ITGB1BP2Q9UKP3 347 aa16.11■□□□□ 0.17
HERC1-207ENST00000560316 DNMT3AQ9Y6K1 912 aaPredicted RBP16.11■□□□□ 0.17
HERC1-207ENST00000560316 HEATR9A2RTY3 570 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 MT-CYBP00156 380 aaPredicted RBP16.1■□□□□ 0.17
HERC1-207ENST00000560316 IGHEP01854 428 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 EDN3P14138 238 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 PVRP15151 417 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 PPIDQ08752 370 aaKnown RBP16.1■□□□□ 0.17
HERC1-207ENST00000560316 KLHL30Q0D2K2 578 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 NOMO1Q15155 1222 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 HADHQ16836 314 aaKnown RBP16.1■□□□□ 0.17
HERC1-207ENST00000560316 LDLRAP1Q5SW96 308 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 FNBP1LQ5T0N5 605 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 FAM151BQ6UXP7 276 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 DET1Q7L5Y6 550 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 PPP1R32Q7Z5V6 425 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 FAR1Q8WVX9 515 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 LURAP1Q96LR2 239 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 TRAPPC9Q96Q05 1148 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 XPO4Q9C0E2 1151 aaKnown RBP16.1■□□□□ 0.17
HERC1-207ENST00000560316 AIPL1Q9NZN9 384 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 GPN3Q9UHW5 284 aaPredicted RBP16.1■□□□□ 0.17
HERC1-207ENST00000560316 FER1L5A0AVI2 2057 aa16.1■□□□□ 0.17
HERC1-207ENST00000560316 CNOT3O75175 753 aaKnown RBP16.09■□□□□ 0.17
HERC1-207ENST00000560316 ALOX12BO75342 701 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 NDST3O95803 873 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 SNRPB2P08579 225 aaKnown RBP16.09■□□□□ 0.17
HERC1-207ENST00000560316 STSP08842 583 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 HBQ1P09105 142 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 MSL3P1P0C860 447 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 PRDX3P30048 256 aaKnown RBP16.09■□□□□ 0.17
HERC1-207ENST00000560316 HMGCLP35914 325 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 PRKCIP41743 596 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 SOX8P57073 446 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 CDC16Q13042 620 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 KRT33BQ14525 404 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 GSE1Q14687 1217 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 SLC9A5Q14940 896 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 PPP2R5EQ16537 467 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 GPRC6AQ5T6X5 926 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 CCDC70Q6NSX1 233 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 CDHR3Q6ZTQ4 885 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 DDHD1Q8NEL9 900 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 DNAJB14Q8TBM8 379 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 PPP4R1Q8TF05 950 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 TADA1Q96BN2 335 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 FAF2Q96CS3 445 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 RMDN2Q96LZ7 410 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 GBP5Q96PP8 586 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 SLC25A51Q9H1U9 297 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 HSD3B7Q9H2F3 369 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 ATP13A2Q9NQ11 1180 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 UBP1Q9NZI7 540 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 NF1P21359 2839 aa16.09■□□□□ 0.17
HERC1-207ENST00000560316 CCDC168Q8NDH2 2452 aa16.08■□□□□ 0.17
HERC1-207ENST00000560316 A0A1B0GUH1 482 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 MGAT4DA6NG13 374 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 BTN3A3O00478 584 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 PMPCBO75439 489 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 POLBP06746 335 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 SLC35G4P0C7Q5 338 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 SPAM1P38567 509 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 TSFMP43897 325 aaKnown RBP16.08■□□□□ 0.16
HERC1-207ENST00000560316 MYL5Q02045 173 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 AP1B1Q10567 949 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 PDK2Q15119 407 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 CYP2A13Q16696 494 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 ZFYVE27Q5T4F4 411 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 GDF7Q7Z4P5 450 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 LILRA3Q8N6C8 439 aaPredicted RBP16.08■□□□□ 0.16
HERC1-207ENST00000560316 OR2Y1Q8NGV0 311 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 CNDP1Q96KN2 507 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 ZNF830Q96NB3 372 aaPredicted RBP16.08■□□□□ 0.16
HERC1-207ENST00000560316 SRMSQ9H3Y6 488 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 ACSL5Q9ULC5 683 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 CDYLQ9Y232 598 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 COLEC10Q9Y6Z7 277 aa16.08■□□□□ 0.16
HERC1-207ENST00000560316 TACC2O95359 2948 aa16.07■□□□□ 0.16
HERC1-207ENST00000560316 DCHS2Q6V1P9 2916 aa16.07■□□□□ 0.16
HERC1-207ENST00000560316 A0A1W2PQJ5 194 aa16.07■□□□□ 0.16
HERC1-207ENST00000560316 MYO1FO00160 1098 aa16.07■□□□□ 0.16
HERC1-207ENST00000560316 BTN3A1O00481 513 aa16.07■□□□□ 0.16
HERC1-207ENST00000560316 MAP3K7O43318 606 aa16.07■□□□□ 0.16
HERC1-207ENST00000560316 BUD23O43709 281 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms