RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 SUFUQ9UMX1 484 aa20.2■□□□□ 0.82
PSEN1-225ENST00000560005 TLDC2A0PJX2 215 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 ENO4A6NNW6 628 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 PMPCBO75439 489 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 MT-CYBP00156 380 aaPredicted RBP20.19■□□□□ 0.82
PSEN1-225ENST00000560005 AGTP01019 485 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 SHBGP04278 402 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 TCN2P20062 427 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 MGAT1P26572 445 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 SSTR1P30872 391 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 CD86P42081 329 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 GRIA1P42261 906 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 PPM1FP49593 454 aaPredicted RBP20.19■□□□□ 0.82
PSEN1-225ENST00000560005 GPX6P59796 221 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 CTBSQ01459 385 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 ABHD18Q0P651 414 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 SPANXN3Q5MJ09 141 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 SNAP47Q5SQN1 464 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 STEAP4Q687X5 459 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 SRLQ86TD4 932 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 ZNF761Q86XN6 746 aaPredicted RBP20.19■□□□□ 0.82
PSEN1-225ENST00000560005 UHMK1Q8TAS1 419 aaKnown RBP20.19■□□□□ 0.82
PSEN1-225ENST00000560005 ECHDC3Q96DC8 303 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 CFAP36Q96G28 342 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 FICDQ9BVA6 458 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 CENPHQ9H3R5 247 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 UBP1Q9NZI7 540 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 IKBKGQ9Y6K9 419 aa20.19■□□□□ 0.82
PSEN1-225ENST00000560005 FAM237BA0A1B0GVD1 139 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 A8MU76 341 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 BANF1O75531 89 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 HLA-DPA1P20036 260 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 CSNK1DP48730 415 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 GPLD1P80108 840 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 MC2RQ01718 297 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 DSC2Q02487 901 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 NIPAL4Q0D2K0 466 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 PCID2Q5JVF3 399 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 PGBD5Q8N414 524 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 FBF1Q8TES7 1133 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 CDKL2Q92772 493 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 NUS1Q96E22 293 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 MRGPRX2Q96LB1 330 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 TEX101Q9BY14 249 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 MRM3Q9HC36 420 aaKnown RBP20.18■□□□□ 0.82
PSEN1-225ENST00000560005 MRPS18BQ9Y676 258 aaKnown RBP20.18■□□□□ 0.82
PSEN1-225ENST00000560005 KCNMB2Q9Y691 235 aa20.18■□□□□ 0.82
PSEN1-225ENST00000560005 LOC285095A0A1B0GVY8 99 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 H3BQF6 201 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 STK17BO94768 372 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 USP1O94782 785 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 MSH2P43246 934 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 POLD2P49005 469 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 MAXP61244 160 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 CDK18Q07002 472 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 BCL2L1Q07817 233 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 NAB1Q13506 487 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 CRTC2Q53ET0 693 aaPredicted RBP20.17■□□□□ 0.82
PSEN1-225ENST00000560005 FHL5Q5TD97 284 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 LGSNQ5TDP6 509 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 CEACAM20Q6UY09 585 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 UNC5AQ6ZN44 842 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 NLRP9Q7RTR0 991 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 IGDCC3Q8IVU1 814 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 ARFGAP2Q8N6H7 521 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 PPHLN1Q8NEY8 458 aaKnown RBP20.17■□□□□ 0.82
PSEN1-225ENST00000560005 GABPB2Q8TAK5 448 aaPredicted RBP20.17■□□□□ 0.82
PSEN1-225ENST00000560005 AHCYL2Q96HN2 611 aaKnown RBP20.17■□□□□ 0.82
PSEN1-225ENST00000560005 COQ10AQ96MF6 247 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 APMAPQ9HDC9 416 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 VPS18Q9P253 973 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 PDP2Q9P2J9 529 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 LGALS13Q9UHV8 139 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 SOX13Q9UN79 622 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 PLEKHM1Q9Y4G2 1056 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 KCTD3Q9Y597 815 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 CACNA1DQ01668 2161 aa20.17■□□□□ 0.82
PSEN1-225ENST00000560005 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.16■□□□□ 0.82
PSEN1-225ENST00000560005 MKRN2OSH3BPM6 223 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 VPS4BO75351 444 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 MMP2P08253 660 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 GNLYP22749 145 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 ADRA1DP25100 572 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 ACTR1BP42025 376 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 SCNN1BP51168 640 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 ACTR1AP61163 376 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 AP1S1P61966 158 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 POLR2LP62875 67 aaKnown RBP20.16■□□□□ 0.82
PSEN1-225ENST00000560005 CDK3Q00526 305 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 PEX6Q13608 980 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 FAM182AQ5T1J6 154 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 TAOK1Q7L7X3 1001 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.16■□□□□ 0.82
PSEN1-225ENST00000560005 ARL8AQ96BM9 186 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 RANBP9Q96S59 729 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 WDR83Q9BRX9 315 aaKnown RBP20.16■□□□□ 0.82
PSEN1-225ENST00000560005 ZPBPQ9BS86 351 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 PRDM8Q9NQV8 689 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 SYBUQ9NX95 663 aa20.16■□□□□ 0.82
PSEN1-225ENST00000560005 B4GALT6Q9UBX8 382 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms