RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 SLC6A18Q96N87 628 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 DUSP15Q9H1R2 295 aaPredicted RBP11.94□□□□□ -0.5
HERC1-205ENST00000559886 DPEP2Q9H4A9 486 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 PSD3Q9NYI0 1048 aa11.94□□□□□ -0.5
HERC1-205ENST00000559886 TCP11X1B4DZS4 312 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 H3BM21 787 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 KLK8O60259 260 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 KCNJ13O60928 360 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 SMIM24O75264 130 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 IPO13O94829 963 aaKnown RBP11.93□□□□□ -0.5
HERC1-205ENST00000559886 C8GP07360 202 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 HK3P52790 923 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 PRKAA2P54646 552 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 DNAJB13P59910 316 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 PTK2BQ14289 1009 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 TGFBIQ15582 683 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 CES4AQ5XG92 561 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 METRNLQ641Q3 311 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 CHST15Q7LFX5 561 aaPredicted RBP11.93□□□□□ -0.5
HERC1-205ENST00000559886 BMP8AQ7Z5Y6 402 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 LONP2Q86WA8 852 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 SLC22A9Q8IVM8 553 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 SKA2Q8WVK7 121 aaPredicted RBP11.93□□□□□ -0.5
HERC1-205ENST00000559886 SREK1Q8WXA9 508 aaKnown RBP11.93□□□□□ -0.5
HERC1-205ENST00000559886 EXT2Q93063 718 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 PDXPQ96GD0 296 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 CYP4F12Q9HCS2 524 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 AASDHPPTQ9NRN7 309 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 MOSPD1Q9UJG1 213 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 OARD1Q9Y530 152 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 KNL1Q8NG31 2342 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 GMNCA6NCL1 334 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 PRR19A6NJB7 356 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 MEI4A8MW99 385 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 SUPT3HB4E1H0 165 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 SLC16A5O15375 505 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 SUPT3HO75486 399 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 SERPINE1P05121 402 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 THEGLP0DJG4 465 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 GRK2P25098 689 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 MAPK9P45984 424 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 GNPDA1P46926 289 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 SEC24CP53992 1094 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 CSTF1Q05048 431 aaKnown RBP11.93□□□□□ -0.5
HERC1-205ENST00000559886 SP140Q13342 867 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 PHKG1Q16816 387 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 ATG16L1Q676U5 607 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 ZCCHC23Q6ZST2 131 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 TMEFF1Q8IYR6 380 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 MFSD2AQ8NA29 543 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 C1orf216Q8TAB5 229 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 DNASE2BQ8WZ79 361 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 CHMP6Q96FZ7 201 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 KLHDC7BQ96G42 594 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 SLC12A9Q9BXP2 914 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 CARS2Q9HA77 564 aaKnown RBP11.93□□□□□ -0.5
HERC1-205ENST00000559886 RDH14Q9HBH5 336 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 KLQ9UEF7 1012 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 PNMA8BQ9ULN7 279 aaPredicted RBP11.93□□□□□ -0.5
HERC1-205ENST00000559886 TMCO1Q9UM00 188 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 DNAJC16Q9Y2G8 782 aa11.93□□□□□ -0.5
HERC1-205ENST00000559886 SPTY2D1-AS1A0A0U1RR47 76 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 H2AFYO75367 372 aaKnown RBP11.92□□□□□ -0.5
HERC1-205ENST00000559886 ENO2P09104 434 aaPredicted RBP11.92□□□□□ -0.5
HERC1-205ENST00000559886 ACP5P13686 325 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 VCLP18206 1134 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 MAOBP27338 520 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 SRP54P61011 504 aaKnown RBP11.92□□□□□ -0.5
HERC1-205ENST00000559886 RACK1P63244 317 aaKnown RBP11.92□□□□□ -0.5
HERC1-205ENST00000559886 BST1Q10588 318 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 ASPHQ12797 758 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 FRA10AC1Q70Z53 315 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 UBE2R2Q712K3 238 aaPredicted RBP11.92□□□□□ -0.5
HERC1-205ENST00000559886 IQCHQ86VS3 1027 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 FBXL6Q8N531 539 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 PPP1R14CQ8TAE6 165 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 TSACCQ96A04 125 aaPredicted RBP11.92□□□□□ -0.5
HERC1-205ENST00000559886 PHF21BQ96EK2 531 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 OR2M4Q96R27 311 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 GATA5Q9BWX5 397 aaPredicted RBP11.92□□□□□ -0.5
HERC1-205ENST00000559886 EPN3Q9H201 632 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 OR52A5Q9H2C5 316 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 PARVBQ9HBI1 364 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 KLC4Q9NSK0 619 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 UTP6Q9NYH9 597 aaKnown RBP11.92□□□□□ -0.5
HERC1-205ENST00000559886 NUDT4Q9NZJ9 180 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 FBXO4Q9UKT5 387 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 GPSM3Q9Y4H4 160 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 DGKBQ9Y6T7 804 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 FANCMQ8IYD8 2048 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 TNRC6BQ9UPQ9 1833 aaKnown RBP11.92□□□□□ -0.5
HERC1-205ENST00000559886 TP53BP1Q12888 1972 aaPredicted RBP11.92□□□□□ -0.5
HERC1-205ENST00000559886 A0A1W2PR77 199 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 FFAR2O15552 330 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 PSIP1O75475 530 aaKnown RBP11.92□□□□□ -0.5
HERC1-205ENST00000559886 GFAPP14136 432 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 ACADLP28330 430 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 CD38P28907 300 aa11.92□□□□□ -0.5
HERC1-205ENST00000559886 NAGLUP54802 743 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms