RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 ZNF77Q15935 545 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 LRIT3Q3SXY7 679 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 MPPE1Q53F39 396 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 MPP7Q5T2T1 576 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 TMTC4Q5T4D3 741 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 RNF219Q5W0B1 726 aaPredicted RBP6.96□□□□□ -1.29
ZEB1-216ENST00000559496 IL31Q6EBC2 164 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 CXorf57Q6NSI4 855 aaKnown RBP6.96□□□□□ -1.29
ZEB1-216ENST00000559496 TUBA3EQ6PEY2 450 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 SYCE2Q6PIF2 218 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 ZNF783Q6ZMS7 281 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 TPGS1Q6ZTW0 290 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 CENPUQ71F23 418 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 NET1Q7Z628 596 aaPredicted RBP6.96□□□□□ -1.29
ZEB1-216ENST00000559496 ADGRG6Q86SQ4 1221 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 ERI1Q8IV48 349 aaKnown RBP6.96□□□□□ -1.29
ZEB1-216ENST00000559496 ARHGAP24Q8N264 748 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 CARNMT1Q8N4J0 409 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 FITM2Q8N6M3 262 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 CELF5Q8N6W0 485 aaKnown RBP6.96□□□□□ -1.29
ZEB1-216ENST00000559496 DTX3Q8N9I9 347 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 TOR1AIP2Q8NFQ8 470 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 OR7D4Q8NG98 312 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 OR52K2Q8NGK3 314 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 DDI1Q8WTU0 396 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 UBLCP1Q8WVY7 318 aaPredicted RBP6.96□□□□□ -1.29
ZEB1-216ENST00000559496 MAML1Q92585 1016 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 ARHGEF2Q92974 986 aaKnown RBP6.96□□□□□ -1.29
ZEB1-216ENST00000559496 FATE1Q969F0 183 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 MBD6Q96DN6 1003 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 PABPC5Q96DU9 382 aaKnown RBP6.96□□□□□ -1.29
ZEB1-216ENST00000559496 MAELQ96JY0 434 aaKnown RBP6.96□□□□□ -1.29
ZEB1-216ENST00000559496 TEKT5Q96M29 485 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 IL12RB2Q99665 862 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 CDC6Q99741 560 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 CENPOQ9BU64 300 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 FRMD8Q9BZ67 464 aaPredicted RBP6.96□□□□□ -1.29
ZEB1-216ENST00000559496 TXLNGYQ9BZA5 131 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 DENND2DQ9H6A0 471 aaPredicted RBP6.96□□□□□ -1.29
ZEB1-216ENST00000559496 IPPKQ9H8X2 491 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 PALMDQ9NP74 551 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 SAYSD1Q9NPB0 183 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 EIF2B3Q9NR50 452 aaKnown RBP6.96□□□□□ -1.29
ZEB1-216ENST00000559496 DLL4Q9NR61 685 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 TBC1D23Q9NUY8 699 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 RBM22Q9NW64 420 aaKnown RBP eCLIP6.96□□□□□ -1.29
ZEB1-216ENST00000559496 IGSF9Q9P2J2 1179 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 TBC1D14Q9P2M4 693 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 FTSJ1Q9UET6 329 aa6.96□□□□□ -1.29
ZEB1-216ENST00000559496 NOSIPQ9Y314 301 aaKnown RBP6.96□□□□□ -1.29
ZEB1-216ENST00000559496 NUP210Q8TEM1 1887 aaPredicted RBP6.96□□□□□ -1.3
ZEB1-216ENST00000559496 CHD5Q8TDI0 1954 aa6.96□□□□□ -1.3
ZEB1-216ENST00000559496 PRRC2BQ5JSZ5 2229 aaKnown RBP6.96□□□□□ -1.3
ZEB1-216ENST00000559496 F8W8V4 182 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 AQP7O14520 342 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 SLC9A3R1O14745 358 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ALOX15BO15296 676 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 MAGEB3O15480 346 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 KDELR3O43731 214 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 SGTAO43765 313 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PRAMEF11O60813 436 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PSMG1O95456 288 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PEX11BO96011 259 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 HLA-DQB2P05538 268 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ENO2P09104 434 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 HOXD9P28356 352 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 GSSP48637 474 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 NUMBP49757 651 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 HNRNPFP52597 415 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 CDK16Q00536 496 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 GAD2Q05329 585 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 COX10Q12887 443 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PDIA2Q13087 525 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ADAM15Q13444 863 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PRPSAP1Q14558 356 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TGFBIQ15582 683 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ZXDCQ2QGD7 858 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ATAT1Q5SQI0 421 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 NDUFAF5Q5TEU4 345 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 MARC1Q5VT66 337 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 CES5AQ6NT32 575 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TRMT10BQ6PF06 316 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TRMT10CQ7L0Y3 403 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 MAMDC2Q7Z304 686 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PDIK1LQ8N165 341 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 KLHL36Q8N4N3 616 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 DCLK2Q8N568 766 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 CNTD1Q8N815 330 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 MCUQ8NE86 351 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TNIP2Q8NFZ5 429 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 LILRB1Q8NHL6 650 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ANGPTL6Q8NI99 470 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 CALML6Q8TD86 181 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 GIPC3Q8TF64 312 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 CDKL2Q92772 493 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 FGF13Q92913 245 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 NMD3Q96D46 503 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 OTUB2Q96DC9 234 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PPP1R2P1Q96PQ5 205 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms