RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 LRRC6Q86X45 466 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 RASGRP3Q8IV61 690 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 SLITRK4Q8IW52 837 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 GSPT2Q8IYD1 628 aaKnown RBP11.17□□□□□ -0.62
SNX1-204ENST00000559061 SLC22A15Q8IZD6 547 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 OTUD6BQ8N6M0 293 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 GSDMBQ8TAX9 411 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 GLMNQ92990 594 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 NDNQ99608 321 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 RHOXF2Q9BQY4 288 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 FAM167BQ9BTA0 163 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 AARSD1Q9BTE6 412 aaKnown RBP11.17□□□□□ -0.62
SNX1-204ENST00000559061 SCNM1Q9BWG6 230 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 LRRN3Q9H3W5 708 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 UCK1Q9HA47 277 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 POT1Q9NUX5 634 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 GNPTGQ9UJJ9 305 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 ACSL5Q9ULC5 683 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 RUVBL2Q9Y230 463 aaKnown RBP11.17□□□□□ -0.62
SNX1-204ENST00000559061 PCDHB1Q9Y5F3 818 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 FREM2Q5SZK8 3169 aa11.17□□□□□ -0.62
SNX1-204ENST00000559061 KLHL33A6NCF5 533 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 LILRA5A6NI73 299 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 FAM159BA6NKW6 160 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 OR5K4A6NMS3 321 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 LIN7AO14910 233 aaPredicted RBP11.16□□□□□ -0.62
SNX1-204ENST00000559061 SNRNP200O75643 2136 aaKnown RBP11.16□□□□□ -0.62
SNX1-204ENST00000559061 MT-CO3P00414 261 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 ESR1P03372 595 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 CAPNS1P04632 268 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 GSTM1P09488 218 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 FAM153BP0C7A2 387 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 PKMP14618 531 aaKnown RBP11.16□□□□□ -0.62
SNX1-204ENST00000559061 VCLP18206 1134 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 MAGEA4P43358 317 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 GPR3P46089 330 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 GSTM4Q03013 218 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 ZFP36L1Q07352 338 aaKnown RBP11.16□□□□□ -0.62
SNX1-204ENST00000559061 RPA4Q13156 261 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 SQSTM1Q13501 440 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 THOC5Q13769 683 aaKnown RBP11.16□□□□□ -0.62
SNX1-204ENST00000559061 GRB7Q14451 532 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 FAM153CQ494X1 144 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 ACSBG2Q5FVE4 666 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 CCNI2Q6ZMN8 369 aaPredicted RBP11.16□□□□□ -0.62
SNX1-204ENST00000559061 SLC9B2Q86UD5 537 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 PIM3Q86V86 326 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 CCDC25Q86WR0 208 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 RELL1Q8IUW5 271 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 LMNTD2Q8IXW0 634 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 PHC3Q8NDX5 983 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 OR6C4Q8NGE1 309 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 CD200R1Q8TD46 325 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 RSC1A1Q92681 617 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 C12orf66Q96MD2 445 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 OLFM1Q99784 485 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 MENTQ9BUN1 341 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 TXLNGYQ9BZA5 131 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 EPB41L4BQ9H329 900 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 SEMA6CQ9H3T2 930 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 ANKZF1Q9H8Y5 726 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 RDH14Q9HBH5 336 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 LATS2Q9NRM7 1088 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 FAM114A2Q9NRY5 505 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 IMP3Q9NV31 184 aaKnown RBP11.16□□□□□ -0.62
SNX1-204ENST00000559061 NINJ2Q9NZG7 142 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 ENTPD2Q9Y5L3 495 aa11.16□□□□□ -0.62
SNX1-204ENST00000559061 RHPN2P1A8MT19 583 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 QSOX1O00391 747 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 NDC80O14777 642 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 WISP3O95389 354 aaPredicted RBP11.15□□□□□ -0.62
SNX1-204ENST00000559061 SLC35G4P0C7Q5 338 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 ALDH4A1P30038 563 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 GFERP55789 205 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 E2F1Q01094 437 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 MGAT5Q09328 741 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 TARDBPQ13148 414 aaKnown RBP eCLIP11.15□□□□□ -0.62
SNX1-204ENST00000559061 ISXQ2M1V0 245 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 CCSMST1Q4G0I0 132 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 PTRHD1Q6GMV3 140 aaKnown RBP11.15□□□□□ -0.62
SNX1-204ENST00000559061 TMEM207Q6UWW9 146 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 KIAA0408Q6ZU52 694 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 SDCCAG8Q86SQ7 713 aaPredicted RBP11.15□□□□□ -0.62
SNX1-204ENST00000559061 ZC3HC1Q86WB0 502 aaKnown RBP11.15□□□□□ -0.62
SNX1-204ENST00000559061 TMPRSS12Q86WS5 348 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 CACTIN-AS1Q8N1I8 211 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 LMNTD1Q8N9Z9 388 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 SIDT2Q8NBJ9 832 aaKnown RBP11.15□□□□□ -0.62
SNX1-204ENST00000559061 OR5AR1Q8NGP9 310 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 PYROXD1Q8WU10 500 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 GATA6Q92908 595 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 PRR11Q96HE9 360 aaPredicted RBP11.15□□□□□ -0.62
SNX1-204ENST00000559061 FUT8Q9BYC5 575 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 FOXP3Q9BZS1 431 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 KIR3DX1Q9H7L2 352 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 SLC24A2Q9UI40 661 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 NFU1Q9UMS0 254 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 NFS1Q9Y697 457 aa11.15□□□□□ -0.62
SNX1-204ENST00000559061 MN1Q10571 1320 aaPredicted RBP11.14□□□□□ -0.63
SNX1-204ENST00000559061 CSO75390 466 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms