RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 CNTD1Q8N815 330 aa17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 GRHL3Q8TE85 626 aa17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 IMP4Q96G21 291 aaKnown RBP17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 AGAP3Q96P47 875 aa17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 TRAPPC9Q96Q05 1148 aa17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 SRMSQ9H3Y6 488 aa17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 FAM8A1Q9UBU6 413 aa17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 NOVA2Q9UNW9 492 aaKnown RBP17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 HEBP2Q9Y5Z4 205 aa17.3■□□□□ 0.36
TSPAN3-204ENST00000558394 AURKAO14965 403 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 KLF7O75840 302 aaPredicted RBP17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 MSL3P1P0C860 447 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 MSH3P20585 1137 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 AKT1P31749 480 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 HMGCLP35914 325 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 SPAM1P38567 509 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 PRKCIP41743 596 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 LMAN1P49257 510 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 ARSEP51690 589 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 PPIDQ08752 370 aaKnown RBP17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 CDC16Q13042 620 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 ZBTB17Q13105 803 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 ITGA9Q13797 1035 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 ANO6Q4KMQ2 910 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 ZNF789Q5FWF6 425 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 FNBP1LQ5T0N5 605 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 FAM151BQ6UXP7 276 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 HOOK3Q86VS8 718 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 DNAJB14Q8TBM8 379 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 PPP4R1Q8TF05 950 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 GBP5Q96PP8 586 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 CEP41Q9BYV8 373 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 SLC25A51Q9H1U9 297 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 ZBTB20Q9HC78 741 aaPredicted RBP17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 AIPL1Q9NZN9 384 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 IFT80Q9P2H3 777 aaPredicted RBP17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 ITGB1BP2Q9UKP3 347 aa17.29■□□□□ 0.36
TSPAN3-204ENST00000558394 KLHL33A6NCF5 533 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 MGAT4DA6NG13 374 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 PRDX3P30048 256 aaKnown RBP17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 SOX8P57073 446 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 SLC10A2Q12908 348 aaPredicted RBP17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 AIMP2Q13155 320 aaKnown RBP17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 HIF1AQ16665 826 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 ATP13A4Q4VNC1 1196 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 DET1Q7L5Y6 550 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 DDHD1Q8NEL9 900 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 ACVR1CQ8NER5 493 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 FAR1Q8WVX9 515 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 LCN9Q8WX39 176 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 PTERQ96BW5 349 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 CNDP1Q96KN2 507 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 THAP2Q9H0W7 228 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 TRABDQ9H4I3 376 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 IL26Q9NPH9 171 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 HEY1Q9Y5J3 304 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 SPO11Q9Y5K1 396 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 AP1M2Q9Y6Q5 423 aa17.28■□□□□ 0.36
TSPAN3-204ENST00000558394 CNTRLQ7Z7A1 2325 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 GLYATL1P3A0A0U1RQE8 302 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 A0A1W2PQJ5 194 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 UGT1A9O60656 530 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 PMPCBO75439 489 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 PYGMP11217 842 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 SKILP12757 684 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 ST6GAL1P15907 406 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 UGT1A6P19224 532 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 UGT1A1P22309 533 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 UGT1A4P22310 534 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 TSFMP43897 325 aaKnown RBP17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 GPRC6AQ5T6X5 926 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 C1orf189Q5VU69 101 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 FAM180AQ6UWF9 173 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 SPDYE1Q8NFV5 336 aaPredicted RBP17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 OR2Y1Q8NGV0 311 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 DTX3LQ8TDB6 740 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 CPLX3Q8WVH0 158 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 UGT1A7Q9HAW7 530 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 UGT1A10Q9HAW8 530 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 UGT1A8Q9HAW9 530 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 PKP3Q9Y446 797 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 GTF3C3Q9Y5Q9 886 aa17.27■□□□□ 0.36
TSPAN3-204ENST00000558394 ANKRD12Q6UB98 2062 aa17.27■□□□□ 0.35
TSPAN3-204ENST00000558394 MYO7BQ6PIF6 2116 aa17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 CCDC66A2RUB6 948 aa17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 E2F3O00716 465 aa17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 OR2B3O76000 313 aa17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 MT-CYBP00156 380 aaPredicted RBP17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 POLBP06746 335 aa17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 STSP08842 583 aa17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 CBSLP0DN79 551 aa17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 PTGER4P35408 488 aa17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 CBSP35520 551 aa17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 DCDP81605 110 aaKnown RBP17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 ART3Q13508 389 aa17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 ZNF169Q14929 603 aaPredicted RBP17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 SLC14A2Q15849 920 aa17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 AGAP7PQ5VUJ5 663 aa17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 ZNF385CQ66K41 422 aaPredicted RBP17.26■□□□□ 0.35
TSPAN3-204ENST00000558394 FCRL6Q6DN72 434 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms